Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S2P56377 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.23■□□□□ 0.19
AP1S2P56377 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S2P56377 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S2P56377 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S2P56377 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S2P56377 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S2P56377 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S2P56377 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.22■□□□□ 0.19
AP1S2P56377 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
AP1S2P56377 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
AP1S2P56377 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
AP1S2P56377 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 ALOX12P2-203ENST00000570921 1945 ntBASIC16.22■□□□□ 0.19
AP1S2P56377 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S2P56377 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
AP1S2P56377 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
AP1S2P56377 RPL13AP23-201ENST00000480739 586 ntBASIC16.22■□□□□ 0.19
AP1S2P56377 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.22■□□□□ 0.19
AP1S2P56377 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.22■□□□□ 0.19
AP1S2P56377 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.22■□□□□ 0.19
AP1S2P56377 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S2P56377 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.22■□□□□ 0.19
AP1S2P56377 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 AC023141.13-201ENST00000604991 943 ntBASIC16.22■□□□□ 0.19
AP1S2P56377 BX640515.1-201ENST00000617215 977 ntBASIC16.22■□□□□ 0.19
AP1S2P56377 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S2P56377 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
AP1S2P56377 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S2P56377 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.22■□□□□ 0.19
AP1S2P56377 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S2P56377 LINC01144-201ENST00000626198 1710 ntBASIC16.22■□□□□ 0.19
AP1S2P56377 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
AP1S2P56377 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.22■□□□□ 0.19
AP1S2P56377 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
AP1S2P56377 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.21■□□□□ 0.19
AP1S2P56377 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.21■□□□□ 0.19
AP1S2P56377 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.21■□□□□ 0.19
AP1S2P56377 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
AP1S2P56377 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.21■□□□□ 0.19
AP1S2P56377 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 AL590627.1-203ENST00000421194 1026 ntBASIC16.21■□□□□ 0.19
AP1S2P56377 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.21■□□□□ 0.19
AP1S2P56377 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.21■□□□□ 0.19
AP1S2P56377 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.21■□□□□ 0.19
AP1S2P56377 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.21■□□□□ 0.19
AP1S2P56377 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.21■□□□□ 0.19
AP1S2P56377 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
AP1S2P56377 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
AP1S2P56377 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.21■□□□□ 0.19
AP1S2P56377 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.21■□□□□ 0.19
AP1S2P56377 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.21■□□□□ 0.19
AP1S2P56377 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.21■□□□□ 0.19
AP1S2P56377 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
AP1S2P56377 AL031055.1-201ENST00000606362 631 ntBASIC16.21■□□□□ 0.19
AP1S2P56377 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
AP1S2P56377 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.21■□□□□ 0.19
AP1S2P56377 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.21■□□□□ 0.19
AP1S2P56377 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S2P56377 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.21■□□□□ 0.19
AP1S2P56377 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.21■□□□□ 0.19
AP1S2P56377 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP1S2P56377 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.21■□□□□ 0.18
AP1S2P56377 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP1S2P56377 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.21■□□□□ 0.18
AP1S2P56377 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
AP1S2P56377 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
AP1S2P56377 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms