Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.09■□□□□ 0.33
ATXN3P54252 HYMAI-201ENST00000635591 3347 ntBASIC17.09■□□□□ 0.33
ATXN3P54252 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATXN3P54252 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.09■□□□□ 0.33
ATXN3P54252 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.09■□□□□ 0.33
ATXN3P54252 AC023141.5-201ENST00000458585 616 ntBASIC17.09■□□□□ 0.33
ATXN3P54252 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 HLA-J-203ENST00000494367 1087 ntBASIC17.09■□□□□ 0.33
ATXN3P54252 CXCL1P1-201ENST00000502804 216 ntBASIC17.09■□□□□ 0.33
ATXN3P54252 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATXN3P54252 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.09■□□□□ 0.33
ATXN3P54252 MIR4745-201ENST00000577608 62 ntBASIC17.09■□□□□ 0.33
ATXN3P54252 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.09■□□□□ 0.33
ATXN3P54252 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.09■□□□□ 0.33
ATXN3P54252 LINC00628-201ENST00000628516 1289 ntBASIC17.09■□□□□ 0.33
ATXN3P54252 AC105339.1-204ENST00000636249 355 ntBASIC17.09■□□□□ 0.33
ATXN3P54252 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ATXN3P54252 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ATXN3P54252 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.09■□□□□ 0.33
ATXN3P54252 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ATXN3P54252 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ATXN3P54252 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ATXN3P54252 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ATXN3P54252 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ATXN3P54252 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATXN3P54252 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATXN3P54252 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATXN3P54252 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATXN3P54252 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATXN3P54252 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATXN3P54252 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATXN3P54252 AGGF1P2-201ENST00000426656 2106 ntBASIC17.08■□□□□ 0.33
ATXN3P54252 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATXN3P54252 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATXN3P54252 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATXN3P54252 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ATXN3P54252 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ATXN3P54252 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.08■□□□□ 0.32
ATXN3P54252 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.08■□□□□ 0.32
ATXN3P54252 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.08■□□□□ 0.32
ATXN3P54252 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.08■□□□□ 0.32
ATXN3P54252 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ATXN3P54252 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.08■□□□□ 0.32
ATXN3P54252 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.08■□□□□ 0.32
ATXN3P54252 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.08■□□□□ 0.32
ATXN3P54252 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.08■□□□□ 0.32
ATXN3P54252 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.08■□□□□ 0.32
ATXN3P54252 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.08■□□□□ 0.32
ATXN3P54252 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.08■□□□□ 0.32
ATXN3P54252 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATXN3P54252 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.07■□□□□ 0.32
ATXN3P54252 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ATXN3P54252 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.07■□□□□ 0.32
ATXN3P54252 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 LINC00982-205ENST00000420957 435 ntBASIC17.07■□□□□ 0.32
ATXN3P54252 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATXN3P54252 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.07■□□□□ 0.32
ATXN3P54252 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.07■□□□□ 0.32
ATXN3P54252 RNA5SP421-201ENST00000516864 134 ntBASIC17.07■□□□□ 0.32
ATXN3P54252 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.07■□□□□ 0.32
ATXN3P54252 AC112191.1-201ENST00000523689 701 ntBASIC17.07■□□□□ 0.32
ATXN3P54252 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.07■□□□□ 0.32
ATXN3P54252 AC190387.1-201ENST00000551683 408 ntBASIC17.07■□□□□ 0.32
ATXN3P54252 AC138761.1-201ENST00000584393 385 ntBASIC17.07■□□□□ 0.32
ATXN3P54252 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.07■□□□□ 0.32
ATXN3P54252 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.07■□□□□ 0.32
ATXN3P54252 AC092902.6-201ENST00000641783 218 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms