Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.15■□□□□ 0.34
ITGA8P53708 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ITGA8P53708 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.15■□□□□ 0.34
ITGA8P53708 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ITGA8P53708 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ITGA8P53708 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.15■□□□□ 0.34
ITGA8P53708 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITGA8P53708 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.15■□□□□ 0.34
ITGA8P53708 MIR4492-201ENST00000581627 80 ntBASIC17.15■□□□□ 0.34
ITGA8P53708 AL591684.3-201ENST00000605187 298 ntBASIC17.15■□□□□ 0.34
ITGA8P53708 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ITGA8P53708 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.15■□□□□ 0.34
ITGA8P53708 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.15■□□□□ 0.34
ITGA8P53708 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.15■□□□□ 0.34
ITGA8P53708 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ITGA8P53708 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ITGA8P53708 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ITGA8P53708 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ITGA8P53708 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ITGA8P53708 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ITGA8P53708 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ITGA8P53708 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITGA8P53708 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGA8P53708 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
ITGA8P53708 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGA8P53708 KRT8P39-201ENST00000396270 1433 ntBASIC17.14■□□□□ 0.33
ITGA8P53708 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGA8P53708 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.14■□□□□ 0.33
ITGA8P53708 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGA8P53708 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.14■□□□□ 0.33
ITGA8P53708 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
ITGA8P53708 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGA8P53708 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGA8P53708 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.14■□□□□ 0.33
ITGA8P53708 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITGA8P53708 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITGA8P53708 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.14■□□□□ 0.33
ITGA8P53708 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGA8P53708 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ITGA8P53708 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.14■□□□□ 0.33
ITGA8P53708 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.14■□□□□ 0.33
ITGA8P53708 MPDU1-223ENST00000582151 728 ntBASIC17.14■□□□□ 0.33
ITGA8P53708 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITGA8P53708 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ITGA8P53708 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ITGA8P53708 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ITGA8P53708 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
ITGA8P53708 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ITGA8P53708 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.14■□□□□ 0.33
ITGA8P53708 AC103702.1-201ENST00000548801 2630 ntBASIC17.14■□□□□ 0.33
ITGA8P53708 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGA8P53708 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ITGA8P53708 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGA8P53708 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
ITGA8P53708 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
ITGA8P53708 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ITGA8P53708 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ITGA8P53708 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ITGA8P53708 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGA8P53708 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ITGA8P53708 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGA8P53708 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGA8P53708 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.13■□□□□ 0.33
ITGA8P53708 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.13■□□□□ 0.33
ITGA8P53708 NPAP1P7-201ENST00000613027 823 ntBASIC17.13■□□□□ 0.33
ITGA8P53708 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.13■□□□□ 0.33
ITGA8P53708 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.13■□□□□ 0.33
ITGA8P53708 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.13■□□□□ 0.33
ITGA8P53708 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITGA8P53708 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA8P53708 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms