Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.25■□□□□ 0.03
SSR4P51571 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SSR4P51571 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.25■□□□□ 0.03
SSR4P51571 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 FAM58DP-201ENST00000428076 619 ntBASIC15.25■□□□□ 0.03
SSR4P51571 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.25■□□□□ 0.03
SSR4P51571 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 RBPMS2P1-201ENST00000437762 623 ntBASIC15.25■□□□□ 0.03
SSR4P51571 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.25■□□□□ 0.03
SSR4P51571 AC105233.2-201ENST00000523697 349 ntBASIC15.25■□□□□ 0.03
SSR4P51571 AF228730.5-201ENST00000530288 346 ntBASIC15.25■□□□□ 0.03
SSR4P51571 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.25■□□□□ 0.03
SSR4P51571 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SSR4P51571 AP000842.3-202ENST00000569238 1080 ntBASIC15.25■□□□□ 0.03
SSR4P51571 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.25■□□□□ 0.03
SSR4P51571 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.25■□□□□ 0.03
SSR4P51571 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SSR4P51571 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSR4P51571 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.25■□□□□ 0.03
SSR4P51571 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SSR4P51571 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.24■□□□□ 0.03
SSR4P51571 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SSR4P51571 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SSR4P51571 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.24■□□□□ 0.03
SSR4P51571 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.24■□□□□ 0.03
SSR4P51571 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
SSR4P51571 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SSR4P51571 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
SSR4P51571 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SSR4P51571 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.24■□□□□ 0.03
SSR4P51571 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 PRYP6-201ENST00000514804 343 ntBASIC15.24■□□□□ 0.03
SSR4P51571 RFPL4AP1-201ENST00000530883 850 ntBASIC15.24■□□□□ 0.03
SSR4P51571 SLC25A39P2-201ENST00000537614 270 ntBASIC15.24■□□□□ 0.03
SSR4P51571 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.24■□□□□ 0.03
SSR4P51571 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 AL138918.1-201ENST00000568306 659 ntBASIC15.24■□□□□ 0.03
SSR4P51571 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.24■□□□□ 0.03
SSR4P51571 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.24■□□□□ 0.03
SSR4P51571 AC106028.4-201ENST00000614509 607 ntBASIC15.24■□□□□ 0.03
SSR4P51571 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.24■□□□□ 0.03
SSR4P51571 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.24■□□□□ 0.03
SSR4P51571 AC084121.4-201ENST00000641598 221 ntBASIC15.24■□□□□ 0.03
SSR4P51571 AF228730.8-201ENST00000642140 221 ntBASIC15.24■□□□□ 0.03
SSR4P51571 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SSR4P51571 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSR4P51571 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SSR4P51571 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSR4P51571 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.23■□□□□ 0.03
SSR4P51571 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSR4P51571 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.23■□□□□ 0.03
SSR4P51571 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSR4P51571 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SSR4P51571 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSR4P51571 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.23■□□□□ 0.03
SSR4P51571 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSR4P51571 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.23■□□□□ 0.03
SSR4P51571 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.23■□□□□ 0.03
SSR4P51571 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms