Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF144AP50876 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
RNF144AP50876 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
RNF144AP50876 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RNF144AP50876 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF144AP50876 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF144AP50876 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 KRT8P49-201ENST00000604166 1432 ntBASIC15.55■□□□□ 0.08
RNF144AP50876 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF144AP50876 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF144AP50876 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF144AP50876 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RNF144AP50876 AC108073.2-201ENST00000464002 357 ntBASIC15.55■□□□□ 0.08
RNF144AP50876 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF144AP50876 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.55■□□□□ 0.08
RNF144AP50876 AC004790.2-201ENST00000623588 572 ntBASIC15.55■□□□□ 0.08
RNF144AP50876 AC116407.3-201ENST00000623905 1129 ntBASIC15.55■□□□□ 0.08
RNF144AP50876 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 AL162727.3-201ENST00000635661 2787 ntBASIC15.55■□□□□ 0.08
RNF144AP50876 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF144AP50876 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF144AP50876 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF144AP50876 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF144AP50876 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.54■□□□□ 0.08
RNF144AP50876 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF144AP50876 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RNF144AP50876 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF144AP50876 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF144AP50876 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF144AP50876 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 TPM4P1-201ENST00000436100 807 ntBASIC15.54■□□□□ 0.08
RNF144AP50876 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF144AP50876 RNA5SP419-201ENST00000515908 135 ntBASIC15.54■□□□□ 0.08
RNF144AP50876 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF144AP50876 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF144AP50876 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF144AP50876 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF144AP50876 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF144AP50876 AC005593.1-201ENST00000624894 515 ntBASIC15.54■□□□□ 0.08
RNF144AP50876 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF144AP50876 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF144AP50876 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
RNF144AP50876 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RNF144AP50876 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF144AP50876 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF144AP50876 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
RNF144AP50876 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF144AP50876 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF144AP50876 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RNF144AP50876 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms