Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF4P48230 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 CALR4P-201ENST00000431943 946 ntBASIC18.69■□□□□ 0.58
TM4SF4P48230 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.69■□□□□ 0.58
TM4SF4P48230 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.69■□□□□ 0.58
TM4SF4P48230 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF4P48230 AC091271.1-201ENST00000611877 1162 ntBASIC18.69■□□□□ 0.58
TM4SF4P48230 AL158212.4-201ENST00000624062 1286 ntBASIC18.69■□□□□ 0.58
TM4SF4P48230 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.69■□□□□ 0.58
TM4SF4P48230 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.69■□□□□ 0.58
TM4SF4P48230 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF4P48230 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.69■□□□□ 0.58
TM4SF4P48230 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
TM4SF4P48230 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF4P48230 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TM4SF4P48230 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.68■□□□□ 0.58
TM4SF4P48230 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.68■□□□□ 0.58
TM4SF4P48230 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TM4SF4P48230 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.68■□□□□ 0.58
TM4SF4P48230 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.68■□□□□ 0.58
TM4SF4P48230 AL118558.3-201ENST00000607414 1079 ntBASIC18.68■□□□□ 0.58
TM4SF4P48230 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TM4SF4P48230 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.68■□□□□ 0.58
TM4SF4P48230 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF4P48230 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TM4SF4P48230 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF4P48230 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF4P48230 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.67■□□□□ 0.58
TM4SF4P48230 AC016694.1-201ENST00000434179 700 ntBASIC18.67■□□□□ 0.58
TM4SF4P48230 AL355864.2-201ENST00000447420 863 ntBASIC18.67■□□□□ 0.58
TM4SF4P48230 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 FTH1P14-201ENST00000482930 551 ntBASIC18.67■□□□□ 0.58
TM4SF4P48230 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TM4SF4P48230 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TM4SF4P48230 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.67■□□□□ 0.58
TM4SF4P48230 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.67■□□□□ 0.58
TM4SF4P48230 LINC01115-203ENST00000606068 577 ntBASIC18.67■□□□□ 0.58
TM4SF4P48230 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.67■□□□□ 0.58
TM4SF4P48230 AC009542.2-202ENST00000619004 1067 ntBASIC18.67■□□□□ 0.58
TM4SF4P48230 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF4P48230 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF4P48230 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF4P48230 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TM4SF4P48230 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TM4SF4P48230 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TM4SF4P48230 AC026954.1-201ENST00000429771 1293 ntBASIC18.66■□□□□ 0.58
TM4SF4P48230 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.66■□□□□ 0.58
TM4SF4P48230 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.66■□□□□ 0.58
TM4SF4P48230 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF4P48230 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.66■□□□□ 0.58
TM4SF4P48230 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.66■□□□□ 0.58
TM4SF4P48230 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.66■□□□□ 0.58
TM4SF4P48230 AP001258.2-201ENST00000529891 490 ntBASIC18.66■□□□□ 0.58
TM4SF4P48230 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.66■□□□□ 0.58
TM4SF4P48230 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.66■□□□□ 0.58
TM4SF4P48230 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TM4SF4P48230 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms