Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CBX5P45973 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CBX5P45973 AC104640.1-201ENST00000562617 2109 ntBASIC14.44□□□□□ -0.1
CBX5P45973 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX5P45973 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX5P45973 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX5P45973 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CBX5P45973 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CBX5P45973 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
CBX5P45973 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CBX5P45973 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CBX5P45973 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 KRT8P10-201ENST00000450021 1447 ntBASIC14.43□□□□□ -0.1
CBX5P45973 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CBX5P45973 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CBX5P45973 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CBX5P45973 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CBX5P45973 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CBX5P45973 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CBX5P45973 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.43□□□□□ -0.1
CBX5P45973 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CBX5P45973 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CBX5P45973 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.43□□□□□ -0.1
CBX5P45973 AL441883.1-201ENST00000566170 1045 ntBASIC14.43□□□□□ -0.1
CBX5P45973 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.43□□□□□ -0.1
CBX5P45973 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
CBX5P45973 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CBX5P45973 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.43□□□□□ -0.1
CBX5P45973 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.43□□□□□ -0.1
CBX5P45973 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.43□□□□□ -0.1
CBX5P45973 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX5P45973 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.43□□□□□ -0.1
CBX5P45973 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.43□□□□□ -0.1
CBX5P45973 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.43□□□□□ -0.1
CBX5P45973 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CBX5P45973 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CBX5P45973 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CBX5P45973 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CBX5P45973 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CBX5P45973 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CBX5P45973 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CBX5P45973 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX5P45973 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 AC125634.1-201ENST00000438758 1403 ntBASIC14.42□□□□□ -0.1
CBX5P45973 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX5P45973 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.42□□□□□ -0.1
CBX5P45973 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 AC003669.1-201ENST00000334569 611 ntBASIC14.42□□□□□ -0.1
CBX5P45973 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.42□□□□□ -0.1
CBX5P45973 LIN28AP1-201ENST00000429574 405 ntBASIC14.42□□□□□ -0.1
CBX5P45973 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.42□□□□□ -0.1
CBX5P45973 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.42□□□□□ -0.1
CBX5P45973 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 GUSBP12-201ENST00000513727 720 ntBASIC14.42□□□□□ -0.1
CBX5P45973 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
CBX5P45973 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX5P45973 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 MIR4497-201ENST00000583208 89 ntBASIC14.42□□□□□ -0.1
CBX5P45973 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.42□□□□□ -0.1
CBX5P45973 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CBX5P45973 AL353593.2-201ENST00000602529 1483 ntBASIC14.42□□□□□ -0.1
CBX5P45973 AL645728.1-201ENST00000366221 2101 ntBASIC14.42□□□□□ -0.1
CBX5P45973 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CBX5P45973 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CBX5P45973 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.42□□□□□ -0.1
CBX5P45973 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms