Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.56■□□□□ 0.24
HMGCLP35914 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.56■□□□□ 0.24
HMGCLP35914 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCLP35914 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.56■□□□□ 0.24
HMGCLP35914 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.56■□□□□ 0.24
HMGCLP35914 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.56■□□□□ 0.24
HMGCLP35914 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.56■□□□□ 0.24
HMGCLP35914 AL078644.1-201ENST00000609881 752 ntBASIC16.56■□□□□ 0.24
HMGCLP35914 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCLP35914 AC092902.6-201ENST00000641783 218 ntBASIC16.56■□□□□ 0.24
HMGCLP35914 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCLP35914 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 OR6D1P-203ENST00000641209 4860 ntBASIC16.56■□□□□ 0.24
HMGCLP35914 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCLP35914 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCLP35914 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HMGCLP35914 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCLP35914 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGCLP35914 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCLP35914 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGCLP35914 AL118508.1-201ENST00000613502 2345 ntBASIC16.55■□□□□ 0.24
HMGCLP35914 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HMGCLP35914 BX842568.4-201ENST00000421222 227 ntBASIC16.55■□□□□ 0.24
HMGCLP35914 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.55■□□□□ 0.24
HMGCLP35914 KRT18P34-201ENST00000488218 1270 ntBASIC16.55■□□□□ 0.24
HMGCLP35914 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HMGCLP35914 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.55■□□□□ 0.24
HMGCLP35914 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCLP35914 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGCLP35914 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.55■□□□□ 0.24
HMGCLP35914 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.55■□□□□ 0.24
HMGCLP35914 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
HMGCLP35914 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HMGCLP35914 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HMGCLP35914 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HMGCLP35914 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCLP35914 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.55■□□□□ 0.24
HMGCLP35914 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HMGCLP35914 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGCLP35914 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCLP35914 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCLP35914 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
HMGCLP35914 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HMGCLP35914 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCLP35914 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HMGCLP35914 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGCLP35914 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCLP35914 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCLP35914 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCLP35914 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCLP35914 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 AKAP8P1-201ENST00000434743 1349 ntBASIC16.54■□□□□ 0.24
HMGCLP35914 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HMGCLP35914 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCLP35914 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCLP35914 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 AC016027.1-202ENST00000607927 1699 ntBASIC16.54■□□□□ 0.24
HMGCLP35914 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCLP35914 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.54■□□□□ 0.24
HMGCLP35914 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 RARRES2P8-201ENST00000566335 367 ntBASIC16.54■□□□□ 0.24
HMGCLP35914 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGCLP35914 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms