Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
THBS4P35443 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS4P35443 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS4P35443 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS4P35443 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS4P35443 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
THBS4P35443 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS4P35443 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.69□□□□□ -0.06
THBS4P35443 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
THBS4P35443 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 AL645728.1-201ENST00000366221 2101 ntBASIC14.69□□□□□ -0.06
THBS4P35443 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.69□□□□□ -0.06
THBS4P35443 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 KRT18P13-201ENST00000400056 1290 ntBASIC14.69□□□□□ -0.06
THBS4P35443 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 BX842568.4-201ENST00000421222 227 ntBASIC14.69□□□□□ -0.06
THBS4P35443 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 AC087163.2-201ENST00000457299 853 ntBASIC14.69□□□□□ -0.06
THBS4P35443 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.69□□□□□ -0.06
THBS4P35443 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.69□□□□□ -0.06
THBS4P35443 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.69□□□□□ -0.06
THBS4P35443 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
THBS4P35443 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.69□□□□□ -0.06
THBS4P35443 AL391256.1-201ENST00000443260 1855 ntBASIC14.69□□□□□ -0.06
THBS4P35443 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
THBS4P35443 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS4P35443 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS4P35443 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
THBS4P35443 AC092171.3-201ENST00000610122 2651 ntBASIC14.69□□□□□ -0.06
THBS4P35443 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
THBS4P35443 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
THBS4P35443 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.68□□□□□ -0.06
THBS4P35443 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
THBS4P35443 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
THBS4P35443 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
THBS4P35443 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 SLC25A6P2-201ENST00000497974 877 ntBASIC14.68□□□□□ -0.06
THBS4P35443 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.68□□□□□ -0.06
THBS4P35443 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.68□□□□□ -0.06
THBS4P35443 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.68□□□□□ -0.06
THBS4P35443 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.68□□□□□ -0.06
THBS4P35443 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
THBS4P35443 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
THBS4P35443 FER1L4-210ENST00000615531 5998 ntBASIC14.68□□□□□ -0.06
THBS4P35443 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.68□□□□□ -0.06
THBS4P35443 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS4P35443 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.68□□□□□ -0.06
THBS4P35443 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
THBS4P35443 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
THBS4P35443 DOC2GP-204ENST00000639052 2548 ntBASIC14.67□□□□□ -0.06
THBS4P35443 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
THBS4P35443 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
THBS4P35443 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
THBS4P35443 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
THBS4P35443 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
THBS4P35443 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
THBS4P35443 LINC00895-201ENST00000629028 1637 ntBASIC14.67□□□□□ -0.06
THBS4P35443 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
THBS4P35443 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
THBS4P35443 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.67□□□□□ -0.06
THBS4P35443 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms