Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RORAP35398 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RORAP35398 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 MIR770-201ENST00000390219 98 ntBASIC15.82■□□□□ 0.12
RORAP35398 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.82■□□□□ 0.12
RORAP35398 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.82■□□□□ 0.12
RORAP35398 AL512356.2-201ENST00000546955 174 ntBASIC15.82■□□□□ 0.12
RORAP35398 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.82■□□□□ 0.12
RORAP35398 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RORAP35398 AC093512.1-201ENST00000617969 520 ntBASIC15.82■□□□□ 0.12
RORAP35398 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.82■□□□□ 0.12
RORAP35398 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.82■□□□□ 0.12
RORAP35398 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RORAP35398 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RORAP35398 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RORAP35398 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.82■□□□□ 0.12
RORAP35398 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.82■□□□□ 0.12
RORAP35398 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.82■□□□□ 0.12
RORAP35398 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RORAP35398 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
RORAP35398 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RORAP35398 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.81■□□□□ 0.12
RORAP35398 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RORAP35398 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RORAP35398 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.81■□□□□ 0.12
RORAP35398 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RORAP35398 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.81■□□□□ 0.12
RORAP35398 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 IGHV3-62-201ENST00000520057 340 ntBASIC15.81■□□□□ 0.12
RORAP35398 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RORAP35398 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 AP001059.3-201ENST00000619053 235 ntBASIC15.81■□□□□ 0.12
RORAP35398 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
RORAP35398 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RORAP35398 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.8■□□□□ 0.12
RORAP35398 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.8■□□□□ 0.12
RORAP35398 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RORAP35398 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RORAP35398 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.8■□□□□ 0.12
RORAP35398 AC016027.1-202ENST00000607927 1699 ntBASIC15.8■□□□□ 0.12
RORAP35398 LINC00895-201ENST00000629028 1637 ntBASIC15.8■□□□□ 0.12
RORAP35398 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RORAP35398 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms