Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RFC4P35249 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.72■□□□□ 0.91
RFC4P35249 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.72■□□□□ 0.91
RFC4P35249 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.72■□□□□ 0.91
RFC4P35249 AC093724.1-201ENST00000448659 1027 ntBASIC20.72■□□□□ 0.91
RFC4P35249 KRT223P-202ENST00000449164 1292 ntBASIC20.72■□□□□ 0.91
RFC4P35249 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.72■□□□□ 0.91
RFC4P35249 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.72■□□□□ 0.91
RFC4P35249 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.72■□□□□ 0.91
RFC4P35249 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.72■□□□□ 0.91
RFC4P35249 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.72■□□□□ 0.91
RFC4P35249 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 MIR6775-201ENST00000617557 69 ntBASIC20.72■□□□□ 0.91
RFC4P35249 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RFC4P35249 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 AL589702.1-201ENST00000641229 1509 ntBASIC20.72■□□□□ 0.91
RFC4P35249 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
RFC4P35249 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.72■□□□□ 0.91
RFC4P35249 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RFC4P35249 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC4P35249 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC4P35249 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC4P35249 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC4P35249 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC4P35249 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC4P35249 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.71■□□□□ 0.91
RFC4P35249 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC4P35249 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC4P35249 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.71■□□□□ 0.91
RFC4P35249 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC4P35249 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.71■□□□□ 0.91
RFC4P35249 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC4P35249 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RFC4P35249 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC4P35249 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.71■□□□□ 0.91
RFC4P35249 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.71■□□□□ 0.91
RFC4P35249 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC4P35249 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RFC4P35249 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC4P35249 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFC4P35249 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RFC4P35249 REXO1L6P-201ENST00000603433 1515 ntBASIC20.71■□□□□ 0.91
RFC4P35249 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC4P35249 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC4P35249 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC4P35249 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RFC4P35249 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RFC4P35249 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
RFC4P35249 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
RFC4P35249 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.7■□□□□ 0.9
RFC4P35249 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.7■□□□□ 0.9
RFC4P35249 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.7■□□□□ 0.9
RFC4P35249 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RFC4P35249 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.7■□□□□ 0.9
RFC4P35249 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.7■□□□□ 0.9
RFC4P35249 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.7■□□□□ 0.9
RFC4P35249 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.7■□□□□ 0.9
RFC4P35249 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.7■□□□□ 0.9
RFC4P35249 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.7■□□□□ 0.9
RFC4P35249 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RFC4P35249 SNX29P1-201ENST00000548357 1007 ntBASIC20.7■□□□□ 0.9
RFC4P35249 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.7■□□□□ 0.9
RFC4P35249 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RFC4P35249 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RFC4P35249 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.7■□□□□ 0.9
RFC4P35249 WFDC1-204ENST00000613603 549 ntBASIC20.7■□□□□ 0.9
RFC4P35249 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.7■□□□□ 0.9
RFC4P35249 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.7■□□□□ 0.9
RFC4P35249 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RFC4P35249 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.7■□□□□ 0.9
RFC4P35249 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.7■□□□□ 0.9
RFC4P35249 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RFC4P35249 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RFC4P35249 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFC4P35249 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.7■□□□□ 0.9
RFC4P35249 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RFC4P35249 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms