Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.9■□□□□ 0.3
RPA3P35244 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.9■□□□□ 0.3
RPA3P35244 SAPCD2P3-201ENST00000455031 850 ntBASIC16.9■□□□□ 0.3
RPA3P35244 UNC93B7-201ENST00000509439 705 ntBASIC16.9■□□□□ 0.3
RPA3P35244 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RPA3P35244 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RPA3P35244 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 MTDHP3-201ENST00000594186 672 ntBASIC16.9■□□□□ 0.3
RPA3P35244 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 REXO1L6P-202ENST00000619970 1078 ntBASIC16.9■□□□□ 0.3
RPA3P35244 AL691432.3-201ENST00000621860 400 ntBASIC16.9■□□□□ 0.3
RPA3P35244 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RPA3P35244 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 AC010491.1-201ENST00000563101 2797 ntBASIC16.9■□□□□ 0.3
RPA3P35244 AC023824.1-201ENST00000562945 2975 ntBASIC16.9■□□□□ 0.3
RPA3P35244 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPA3P35244 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.89■□□□□ 0.3
RPA3P35244 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RPA3P35244 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.89■□□□□ 0.3
RPA3P35244 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
RPA3P35244 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RPA3P35244 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.89■□□□□ 0.3
RPA3P35244 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
RPA3P35244 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.89■□□□□ 0.3
RPA3P35244 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.89■□□□□ 0.3
RPA3P35244 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RPA3P35244 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 AC092850.2-201ENST00000623821 2697 ntBASIC16.89■□□□□ 0.29
RPA3P35244 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.89■□□□□ 0.29
RPA3P35244 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.89■□□□□ 0.29
RPA3P35244 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.89■□□□□ 0.29
RPA3P35244 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RPA3P35244 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RPA3P35244 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.89■□□□□ 0.29
RPA3P35244 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.89■□□□□ 0.29
RPA3P35244 AC106795.1-205ENST00000512851 1056 ntBASIC16.89■□□□□ 0.29
RPA3P35244 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.89■□□□□ 0.29
RPA3P35244 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.89■□□□□ 0.29
RPA3P35244 AL603832.2-201ENST00000566195 2125 ntBASIC16.89■□□□□ 0.29
RPA3P35244 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.89■□□□□ 0.29
RPA3P35244 AC008608.2-201ENST00000606089 416 ntBASIC16.89■□□□□ 0.29
RPA3P35244 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RPA3P35244 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RPA3P35244 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.89■□□□□ 0.29
RPA3P35244 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPA3P35244 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.88■□□□□ 0.29
RPA3P35244 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RPA3P35244 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.88■□□□□ 0.29
RPA3P35244 AL020989.1-201ENST00000422979 469 ntBASIC16.88■□□□□ 0.29
RPA3P35244 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RPA3P35244 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.88■□□□□ 0.29
RPA3P35244 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.88■□□□□ 0.29
RPA3P35244 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.88■□□□□ 0.29
RPA3P35244 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms