Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CTNNA1P35221 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.66■□□□□ 0.42
CTNNA1P35221 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.66■□□□□ 0.42
CTNNA1P35221 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.66■□□□□ 0.42
CTNNA1P35221 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CTNNA1P35221 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.66■□□□□ 0.42
CTNNA1P35221 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.66■□□□□ 0.42
CTNNA1P35221 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTNNA1P35221 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CTNNA1P35221 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTNNA1P35221 AL589182.2-201ENST00000619332 1049 ntBASIC17.66■□□□□ 0.42
CTNNA1P35221 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.66■□□□□ 0.42
CTNNA1P35221 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.66■□□□□ 0.42
CTNNA1P35221 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.66■□□□□ 0.42
CTNNA1P35221 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.66■□□□□ 0.42
CTNNA1P35221 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 SNX33P1-201ENST00000592116 1762 ntBASIC17.66■□□□□ 0.42
CTNNA1P35221 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNNA1P35221 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 AC005052.1-201ENST00000625181 2492 ntBASIC17.65■□□□□ 0.42
CTNNA1P35221 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 AL365203.3-201ENST00000609742 2057 ntBASIC17.65■□□□□ 0.42
CTNNA1P35221 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.65■□□□□ 0.42
CTNNA1P35221 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CTNNA1P35221 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CTNNA1P35221 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 PAWRP1-201ENST00000451083 565 ntBASIC17.65■□□□□ 0.42
CTNNA1P35221 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.65■□□□□ 0.42
CTNNA1P35221 KRT18P35-201ENST00000510488 1269 ntBASIC17.65■□□□□ 0.42
CTNNA1P35221 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTNNA1P35221 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.65■□□□□ 0.42
CTNNA1P35221 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNNA1P35221 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNNA1P35221 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CTNNA1P35221 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.65■□□□□ 0.42
CTNNA1P35221 PKD1P5-201ENST00000532415 10291 ntBASIC17.65■□□□□ 0.42
CTNNA1P35221 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.64■□□□□ 0.42
CTNNA1P35221 AL356309.3-201ENST00000624132 1934 ntBASIC17.64■□□□□ 0.42
CTNNA1P35221 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CTNNA1P35221 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNNA1P35221 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNNA1P35221 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNNA1P35221 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNNA1P35221 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CTNNA1P35221 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.64■□□□□ 0.41
CTNNA1P35221 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.64■□□□□ 0.41
CTNNA1P35221 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNNA1P35221 FOSL1P1-201ENST00000511041 816 ntBASIC17.64■□□□□ 0.41
CTNNA1P35221 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CTNNA1P35221 AL732292.2-201ENST00000609649 430 ntBASIC17.64■□□□□ 0.41
CTNNA1P35221 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNNA1P35221 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNNA1P35221 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNNA1P35221 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms