Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CD40LGP29965 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40LGP29965 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.83□□□□□ -0.04
CD40LGP29965 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.83□□□□□ -0.04
CD40LGP29965 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD40LGP29965 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40LGP29965 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CD40LGP29965 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD40LGP29965 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40LGP29965 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40LGP29965 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40LGP29965 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CD40LGP29965 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.82□□□□□ -0.04
CD40LGP29965 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD40LGP29965 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.82□□□□□ -0.04
CD40LGP29965 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.82□□□□□ -0.04
CD40LGP29965 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 MYCLP1-201ENST00000372451 1075 ntBASIC14.82□□□□□ -0.04
CD40LGP29965 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.82□□□□□ -0.04
CD40LGP29965 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.82□□□□□ -0.04
CD40LGP29965 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.82□□□□□ -0.04
CD40LGP29965 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
CD40LGP29965 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.82□□□□□ -0.04
CD40LGP29965 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 LINC00528-201ENST00000600723 2160 ntBASIC14.82□□□□□ -0.04
CD40LGP29965 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.82□□□□□ -0.04
CD40LGP29965 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40LGP29965 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40LGP29965 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CD40LGP29965 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CD40LGP29965 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.81□□□□□ -0.04
CD40LGP29965 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CD40LGP29965 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD40LGP29965 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.81□□□□□ -0.04
CD40LGP29965 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CD40LGP29965 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 CDC14C-201ENST00000428251 1719 ntBASIC14.81□□□□□ -0.04
CD40LGP29965 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.81□□□□□ -0.04
CD40LGP29965 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.81□□□□□ -0.04
CD40LGP29965 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.81□□□□□ -0.04
CD40LGP29965 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.81□□□□□ -0.04
CD40LGP29965 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.81□□□□□ -0.04
CD40LGP29965 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 BX088651.1-201ENST00000540551 451 ntBASIC14.81□□□□□ -0.04
CD40LGP29965 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.81□□□□□ -0.04
CD40LGP29965 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 AC010240.3-201ENST00000607688 395 ntBASIC14.81□□□□□ -0.04
CD40LGP29965 AC112497.1-201ENST00000624824 639 ntBASIC14.81□□□□□ -0.04
CD40LGP29965 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40LGP29965 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.81□□□□□ -0.04
CD40LGP29965 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms