Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN6P29350 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN6P29350 AL031731.1-201ENST00000642131 2094 ntBASIC15.85■□□□□ 0.13
PTPN6P29350 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
PTPN6P29350 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN6P29350 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN6P29350 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
PTPN6P29350 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
PTPN6P29350 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN6P29350 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN6P29350 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN6P29350 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN6P29350 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTPN6P29350 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PTPN6P29350 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 AL596087.1-201ENST00000400979 1969 ntBASIC15.84■□□□□ 0.13
PTPN6P29350 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTPN6P29350 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PTPN6P29350 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN6P29350 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.84■□□□□ 0.13
PTPN6P29350 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN6P29350 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN6P29350 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN6P29350 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.84■□□□□ 0.13
PTPN6P29350 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN6P29350 MPDU1-223ENST00000582151 728 ntBASIC15.84■□□□□ 0.13
PTPN6P29350 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.84■□□□□ 0.13
PTPN6P29350 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN6P29350 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
PTPN6P29350 AL589182.2-201ENST00000619332 1049 ntBASIC15.84■□□□□ 0.13
PTPN6P29350 AC008735.5-201ENST00000623544 497 ntBASIC15.84■□□□□ 0.13
PTPN6P29350 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.84■□□□□ 0.13
PTPN6P29350 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN6P29350 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTPN6P29350 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PTPN6P29350 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN6P29350 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN6P29350 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN6P29350 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN6P29350 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN6P29350 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
PTPN6P29350 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN6P29350 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN6P29350 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN6P29350 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.83■□□□□ 0.13
PTPN6P29350 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
PTPN6P29350 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.83■□□□□ 0.13
PTPN6P29350 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN6P29350 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 AC105917.1-201ENST00000506637 2539 ntBASIC15.83■□□□□ 0.12
PTPN6P29350 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN6P29350 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.83■□□□□ 0.12
PTPN6P29350 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN6P29350 AC012640.2-201ENST00000561606 901 ntBASIC15.83■□□□□ 0.12
PTPN6P29350 AC139887.3-201ENST00000568585 713 ntBASIC15.83■□□□□ 0.12
PTPN6P29350 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN6P29350 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.83■□□□□ 0.12
PTPN6P29350 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PTPN6P29350 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.83■□□□□ 0.12
PTPN6P29350 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PTPN6P29350 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 AC002310.6-201ENST00000624451 1377 ntBASIC15.83■□□□□ 0.12
PTPN6P29350 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN6P29350 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PTPN6P29350 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.83■□□□□ 0.12
PTPN6P29350 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN6P29350 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PTPN6P29350 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PTPN6P29350 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN6P29350 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.83■□□□□ 0.12
PTPN6P29350 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PTPN6P29350 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms