Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN3P26045 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PTPN3P26045 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.98■□□□□ 0.31
PTPN3P26045 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN3P26045 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN3P26045 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN3P26045 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PTPN3P26045 RNU1-129P-201ENST00000384064 167 ntBASIC16.98■□□□□ 0.31
PTPN3P26045 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PTPN3P26045 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PTPN3P26045 RPL13AP23-201ENST00000480739 586 ntBASIC16.98■□□□□ 0.31
PTPN3P26045 AL031432.2-201ENST00000566714 459 ntBASIC16.98■□□□□ 0.31
PTPN3P26045 AL928711.1-201ENST00000570165 459 ntBASIC16.98■□□□□ 0.31
PTPN3P26045 U1.21-201ENST00000580816 167 ntBASIC16.98■□□□□ 0.31
PTPN3P26045 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PTPN3P26045 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PTPN3P26045 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN3P26045 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.98■□□□□ 0.31
PTPN3P26045 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN3P26045 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN3P26045 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN3P26045 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 PCGF3-213ENST00000620529 1899 ntBASIC16.97■□□□□ 0.31
PTPN3P26045 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN3P26045 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN3P26045 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN3P26045 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN3P26045 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN3P26045 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN3P26045 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN3P26045 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN3P26045 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN3P26045 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN3P26045 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN3P26045 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN3P26045 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PTPN3P26045 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PTPN3P26045 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PTPN3P26045 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PTPN3P26045 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN3P26045 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.96■□□□□ 0.31
PTPN3P26045 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PTPN3P26045 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PTPN3P26045 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PTPN3P26045 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
PTPN3P26045 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 AL590627.1-203ENST00000421194 1026 ntBASIC16.96■□□□□ 0.31
PTPN3P26045 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN3P26045 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.96■□□□□ 0.31
PTPN3P26045 SLC25A1P1-201ENST00000528351 927 ntBASIC16.96■□□□□ 0.31
PTPN3P26045 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN3P26045 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.96■□□□□ 0.31
PTPN3P26045 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PTPN3P26045 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN3P26045 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN3P26045 AL031055.1-201ENST00000606362 631 ntBASIC16.96■□□□□ 0.31
PTPN3P26045 AC064836.3-201ENST00000607928 673 ntBASIC16.96■□□□□ 0.31
PTPN3P26045 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.96■□□□□ 0.31
PTPN3P26045 AC018695.7-201ENST00000624587 2492 ntBASIC16.96■□□□□ 0.31
PTPN3P26045 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN3P26045 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms