Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40P25942 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CD40P25942 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CD40P25942 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.34□□□□□ -0.11
CD40P25942 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40P25942 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.34□□□□□ -0.11
CD40P25942 CNN2P2-201ENST00000443536 909 ntBASIC14.34□□□□□ -0.11
CD40P25942 CNN2P3-201ENST00000450201 906 ntBASIC14.34□□□□□ -0.11
CD40P25942 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CD40P25942 AC067863.1-201ENST00000494933 530 ntBASIC14.34□□□□□ -0.11
CD40P25942 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40P25942 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.34□□□□□ -0.11
CD40P25942 AC105233.2-201ENST00000523697 349 ntBASIC14.34□□□□□ -0.11
CD40P25942 AF228730.5-201ENST00000530288 346 ntBASIC14.34□□□□□ -0.11
CD40P25942 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CD40P25942 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.34□□□□□ -0.11
CD40P25942 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CD40P25942 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.34□□□□□ -0.11
CD40P25942 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 AC015911.4-201ENST00000588022 1070 ntBASIC14.34□□□□□ -0.11
CD40P25942 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.34□□□□□ -0.11
CD40P25942 AL136317.3-201ENST00000618497 906 ntBASIC14.34□□□□□ -0.11
CD40P25942 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40P25942 Z92544.3-201ENST00000624747 417 ntBASIC14.34□□□□□ -0.11
CD40P25942 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40P25942 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CD40P25942 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CD40P25942 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.34□□□□□ -0.11
CD40P25942 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.34□□□□□ -0.11
CD40P25942 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CD40P25942 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CD40P25942 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD40P25942 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD40P25942 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD40P25942 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD40P25942 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.33□□□□□ -0.11
CD40P25942 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.33□□□□□ -0.12
CD40P25942 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CD40P25942 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40P25942 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
CD40P25942 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40P25942 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CD40P25942 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.33□□□□□ -0.12
CD40P25942 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.33□□□□□ -0.12
CD40P25942 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40P25942 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.33□□□□□ -0.12
CD40P25942 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40P25942 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40P25942 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.33□□□□□ -0.12
CD40P25942 AC069262.1-201ENST00000539058 672 ntBASIC14.33□□□□□ -0.12
CD40P25942 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40P25942 AC026150.2-201ENST00000564693 1156 ntBASIC14.33□□□□□ -0.12
CD40P25942 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.33□□□□□ -0.12
CD40P25942 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 AC093512.1-201ENST00000617969 520 ntBASIC14.33□□□□□ -0.12
CD40P25942 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.33□□□□□ -0.12
CD40P25942 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40P25942 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms