Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL8A2P25067 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
COL8A2P25067 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
COL8A2P25067 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.08□□□□□ -0.16
COL8A2P25067 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL8A2P25067 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 WASH6P-202ENST00000359512 1437 ntBASIC14.07□□□□□ -0.16
COL8A2P25067 CICP6-201ENST00000457191 2729 ntBASIC14.07□□□□□ -0.16
COL8A2P25067 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
COL8A2P25067 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
COL8A2P25067 UXT-AS1-201ENST00000590504 1525 ntBASIC14.07□□□□□ -0.16
COL8A2P25067 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.07□□□□□ -0.16
COL8A2P25067 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COL8A2P25067 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 FAM58DP-201ENST00000428076 619 ntBASIC14.07□□□□□ -0.16
COL8A2P25067 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.07□□□□□ -0.16
COL8A2P25067 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.07□□□□□ -0.16
COL8A2P25067 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.07□□□□□ -0.16
COL8A2P25067 AC069335.1-201ENST00000489972 472 ntBASIC14.07□□□□□ -0.16
COL8A2P25067 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
COL8A2P25067 LINC01225-203ENST00000563550 1244 ntBASIC14.07□□□□□ -0.16
COL8A2P25067 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
COL8A2P25067 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.07□□□□□ -0.16
COL8A2P25067 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
COL8A2P25067 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.07□□□□□ -0.16
COL8A2P25067 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.07□□□□□ -0.16
COL8A2P25067 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.07□□□□□ -0.16
COL8A2P25067 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.07□□□□□ -0.16
COL8A2P25067 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.07□□□□□ -0.16
COL8A2P25067 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COL8A2P25067 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
COL8A2P25067 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
COL8A2P25067 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COL8A2P25067 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
COL8A2P25067 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL8A2P25067 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
COL8A2P25067 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.06□□□□□ -0.16
COL8A2P25067 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.06□□□□□ -0.16
COL8A2P25067 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
COL8A2P25067 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
COL8A2P25067 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
COL8A2P25067 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.06□□□□□ -0.16
COL8A2P25067 AC006277.1-201ENST00000624348 1610 ntBASIC14.06□□□□□ -0.16
COL8A2P25067 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
COL8A2P25067 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.06□□□□□ -0.16
COL8A2P25067 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.06□□□□□ -0.16
COL8A2P25067 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.06□□□□□ -0.16
COL8A2P25067 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.06□□□□□ -0.16
COL8A2P25067 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.06□□□□□ -0.16
COL8A2P25067 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.06□□□□□ -0.16
COL8A2P25067 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
COL8A2P25067 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.06□□□□□ -0.16
COL8A2P25067 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.06□□□□□ -0.16
COL8A2P25067 AC025678.2-201ENST00000562061 970 ntBASIC14.06□□□□□ -0.16
COL8A2P25067 MIR3909-201ENST00000579518 119 ntBASIC14.06□□□□□ -0.16
COL8A2P25067 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.06□□□□□ -0.16
COL8A2P25067 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.06□□□□□ -0.16
COL8A2P25067 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
COL8A2P25067 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.06□□□□□ -0.16
COL8A2P25067 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
COL8A2P25067 AL671710.1-201ENST00000610245 2349 ntBASIC14.06□□□□□ -0.16
COL8A2P25067 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL8A2P25067 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms