Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP11P24347 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MMP11P24347 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP11P24347 AC004461.1-201ENST00000412461 403 ntBASIC15.82■□□□□ 0.12
MMP11P24347 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 ADH5P3-201ENST00000433842 1137 ntBASIC15.82■□□□□ 0.12
MMP11P24347 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP11P24347 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP11P24347 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.82■□□□□ 0.12
MMP11P24347 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP11P24347 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MMP11P24347 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP11P24347 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.82■□□□□ 0.12
MMP11P24347 AC027612.4-201ENST00000605371 583 ntBASIC15.82■□□□□ 0.12
MMP11P24347 AL355385.1-201ENST00000606123 409 ntBASIC15.82■□□□□ 0.12
MMP11P24347 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP11P24347 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP11P24347 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP11P24347 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
MMP11P24347 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP11P24347 AL353732.1-201ENST00000569618 1459 ntBASIC15.82■□□□□ 0.12
MMP11P24347 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 AC012569.1-201ENST00000591191 1524 ntBASIC15.82■□□□□ 0.12
MMP11P24347 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MMP11P24347 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MMP11P24347 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MMP11P24347 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP11P24347 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
MMP11P24347 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MMP11P24347 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP11P24347 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MMP11P24347 DOC2GP-204ENST00000639052 2548 ntBASIC15.82■□□□□ 0.12
MMP11P24347 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MMP11P24347 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MMP11P24347 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MMP11P24347 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
MMP11P24347 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
MMP11P24347 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MMP11P24347 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
MMP11P24347 AC022145.2-201ENST00000598203 171 ntBASIC15.81■□□□□ 0.12
MMP11P24347 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.81■□□□□ 0.12
MMP11P24347 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MMP11P24347 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MMP11P24347 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MMP11P24347 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.8■□□□□ 0.12
MMP11P24347 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
MMP11P24347 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
MMP11P24347 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
MMP11P24347 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
MMP11P24347 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 TOP3BP1-201ENST00000420768 1380 ntBASIC15.8■□□□□ 0.12
MMP11P24347 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.8■□□□□ 0.12
MMP11P24347 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms