Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RAB4AP20338 MFAP1P1-201ENST00000442257 1255 ntBASIC12.84□□□□□ -0.35
RAB4AP20338 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.84□□□□□ -0.35
RAB4AP20338 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.84□□□□□ -0.35
RAB4AP20338 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.84□□□□□ -0.35
RAB4AP20338 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.84□□□□□ -0.35
RAB4AP20338 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB4AP20338 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RAB4AP20338 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB4AP20338 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB4AP20338 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RAB4AP20338 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB4AP20338 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
RAB4AP20338 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RAB4AP20338 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB4AP20338 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RAB4AP20338 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB4AP20338 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB4AP20338 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB4AP20338 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RAB4AP20338 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
RAB4AP20338 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RAB4AP20338 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
RAB4AP20338 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.83□□□□□ -0.35
RAB4AP20338 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RAB4AP20338 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RAB4AP20338 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RAB4AP20338 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
RAB4AP20338 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB4AP20338 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB4AP20338 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.83□□□□□ -0.36
RAB4AP20338 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB4AP20338 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.83□□□□□ -0.36
RAB4AP20338 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB4AP20338 SLC25A1P4-201ENST00000567977 778 ntBASIC12.83□□□□□ -0.36
RAB4AP20338 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 AL109923.1-201ENST00000618799 583 ntBASIC12.83□□□□□ -0.36
RAB4AP20338 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB4AP20338 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB4AP20338 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RAB4AP20338 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RAB4AP20338 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RAB4AP20338 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB4AP20338 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB4AP20338 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB4AP20338 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB4AP20338 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB4AP20338 AC007191.1-201ENST00000623179 2995 ntBASIC12.83□□□□□ -0.36
RAB4AP20338 AC007686.3-201ENST00000619017 3487 ntBASIC12.83□□□□□ -0.36
RAB4AP20338 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.83□□□□□ -0.36
RAB4AP20338 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB4AP20338 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RAB4AP20338 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RAB4AP20338 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
RAB4AP20338 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB4AP20338 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB4AP20338 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB4AP20338 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB4AP20338 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAB4AP20338 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms