Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CD58P19256 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.9■□□□□ 0.46
CD58P19256 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
CD58P19256 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CD58P19256 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
CD58P19256 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CD58P19256 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.89■□□□□ 0.45
CD58P19256 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.89■□□□□ 0.45
CD58P19256 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.89■□□□□ 0.45
CD58P19256 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CD58P19256 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CD58P19256 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.89■□□□□ 0.45
CD58P19256 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.89■□□□□ 0.45
CD58P19256 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CD58P19256 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.89■□□□□ 0.45
CD58P19256 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
CD58P19256 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.89■□□□□ 0.45
CD58P19256 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.89■□□□□ 0.45
CD58P19256 AC040169.1-201ENST00000565382 521 ntBASIC17.89■□□□□ 0.45
CD58P19256 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.89■□□□□ 0.45
CD58P19256 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.89■□□□□ 0.45
CD58P19256 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.89■□□□□ 0.45
CD58P19256 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CD58P19256 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.89■□□□□ 0.45
CD58P19256 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.89■□□□□ 0.45
CD58P19256 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.89■□□□□ 0.45
CD58P19256 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.89■□□□□ 0.45
CD58P19256 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD58P19256 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.88■□□□□ 0.45
CD58P19256 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CD58P19256 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.88■□□□□ 0.45
CD58P19256 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD58P19256 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD58P19256 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.88■□□□□ 0.45
CD58P19256 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CD58P19256 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CD58P19256 AC006538.1-201ENST00000567905 1585 ntBASIC17.88■□□□□ 0.45
CD58P19256 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD58P19256 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CD58P19256 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CD58P19256 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD58P19256 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.88■□□□□ 0.45
CD58P19256 AC074386.1-202ENST00000463561 864 ntBASIC17.88■□□□□ 0.45
CD58P19256 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.88■□□□□ 0.45
CD58P19256 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.88■□□□□ 0.45
CD58P19256 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.88■□□□□ 0.45
CD58P19256 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD58P19256 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD58P19256 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.88■□□□□ 0.45
CD58P19256 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD58P19256 AL512652.2-201ENST00000625156 1716 ntBASIC17.88■□□□□ 0.45
CD58P19256 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD58P19256 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CD58P19256 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD58P19256 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CD58P19256 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CD58P19256 KRT8P39-201ENST00000396270 1433 ntBASIC17.88■□□□□ 0.45
CD58P19256 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.88■□□□□ 0.45
CD58P19256 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.87■□□□□ 0.45
CD58P19256 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CD58P19256 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 RNU1-129P-201ENST00000384064 167 ntBASIC17.87■□□□□ 0.45
CD58P19256 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.87■□□□□ 0.45
CD58P19256 U1.21-201ENST00000580816 167 ntBASIC17.87■□□□□ 0.45
CD58P19256 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.87■□□□□ 0.45
CD58P19256 AL031055.1-201ENST00000606362 631 ntBASIC17.87■□□□□ 0.45
CD58P19256 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CD58P19256 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CD58P19256 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.87■□□□□ 0.45
CD58P19256 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.87■□□□□ 0.45
CD58P19256 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD58P19256 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms