Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AL671883.3-201ENST00000603274 991 ntBASIC17.14■□□□□ 0.33
ERCC2P18074 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.14■□□□□ 0.33
ERCC2P18074 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
ERCC2P18074 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC2P18074 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC2P18074 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ERCC2P18074 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
ERCC2P18074 ME2P1-201ENST00000426028 1970 ntBASIC17.13■□□□□ 0.33
ERCC2P18074 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.13■□□□□ 0.33
ERCC2P18074 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ERCC2P18074 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 AC140658.5-201ENST00000438532 169 ntBASIC17.13■□□□□ 0.33
ERCC2P18074 AC074386.1-202ENST00000463561 864 ntBASIC17.13■□□□□ 0.33
ERCC2P18074 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.13■□□□□ 0.33
ERCC2P18074 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ERCC2P18074 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.13■□□□□ 0.33
ERCC2P18074 AL009183.1-201ENST00000603760 355 ntBASIC17.13■□□□□ 0.33
ERCC2P18074 AC021097.1-201ENST00000607902 574 ntBASIC17.13■□□□□ 0.33
ERCC2P18074 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.13■□□□□ 0.33
ERCC2P18074 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.13■□□□□ 0.33
ERCC2P18074 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 AC092919.2-201ENST00000623631 1645 ntBASIC17.13■□□□□ 0.33
ERCC2P18074 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC2P18074 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC2P18074 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.12■□□□□ 0.33
ERCC2P18074 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC2P18074 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.12■□□□□ 0.33
ERCC2P18074 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC2P18074 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
ERCC2P18074 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC2P18074 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.12■□□□□ 0.33
ERCC2P18074 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.12■□□□□ 0.33
ERCC2P18074 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC2P18074 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.12■□□□□ 0.33
ERCC2P18074 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ERCC2P18074 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ERCC2P18074 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC2P18074 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ERCC2P18074 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC2P18074 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.12■□□□□ 0.33
ERCC2P18074 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.12■□□□□ 0.33
ERCC2P18074 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.12■□□□□ 0.33
ERCC2P18074 AC023274.1-201ENST00000418278 595 ntBASIC17.12■□□□□ 0.33
ERCC2P18074 PGAM5P1-201ENST00000518923 814 ntBASIC17.12■□□□□ 0.33
ERCC2P18074 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.12■□□□□ 0.33
ERCC2P18074 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.12■□□□□ 0.33
ERCC2P18074 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.12■□□□□ 0.33
ERCC2P18074 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.12■□□□□ 0.33
ERCC2P18074 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.12■□□□□ 0.33
ERCC2P18074 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC2P18074 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.12■□□□□ 0.33
ERCC2P18074 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERCC2P18074 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ERCC2P18074 PCGF3-213ENST00000620529 1899 ntBASIC17.12■□□□□ 0.33
ERCC2P18074 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.11■□□□□ 0.33
ERCC2P18074 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.11■□□□□ 0.33
ERCC2P18074 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ERCC2P18074 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.11■□□□□ 0.33
ERCC2P18074 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ERCC2P18074 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.11■□□□□ 0.33
ERCC2P18074 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.11■□□□□ 0.33
ERCC2P18074 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms