Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN1P18031 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 AC005237.2-201ENST00000434368 219 ntBASIC17.62■□□□□ 0.41
PTPN1P18031 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN1P18031 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.62■□□□□ 0.41
PTPN1P18031 AC093520.2-201ENST00000561830 333 ntBASIC17.62■□□□□ 0.41
PTPN1P18031 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN1P18031 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PTPN1P18031 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PTPN1P18031 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPN1P18031 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.62■□□□□ 0.41
PTPN1P18031 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN1P18031 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPN1P18031 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN1P18031 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PTPN1P18031 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN1P18031 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN1P18031 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PTPN1P18031 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 AL031731.1-201ENST00000642131 2094 ntBASIC17.61■□□□□ 0.41
PTPN1P18031 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN1P18031 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN1P18031 AL138918.1-201ENST00000568306 659 ntBASIC17.61■□□□□ 0.41
PTPN1P18031 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.61■□□□□ 0.41
PTPN1P18031 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN1P18031 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN1P18031 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTPN1P18031 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PTPN1P18031 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PTPN1P18031 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN1P18031 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN1P18031 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
PTPN1P18031 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PTPN1P18031 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPN1P18031 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.6■□□□□ 0.41
PTPN1P18031 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PTPN1P18031 AL627223.1-201ENST00000416693 442 ntBASIC17.6■□□□□ 0.41
PTPN1P18031 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPN1P18031 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN1P18031 AC069335.1-201ENST00000489972 472 ntBASIC17.6■□□□□ 0.41
PTPN1P18031 IGHV3-62-201ENST00000520057 340 ntBASIC17.6■□□□□ 0.41
PTPN1P18031 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPN1P18031 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN1P18031 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
PTPN1P18031 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 AC027307.2-201ENST00000591252 911 ntBASIC17.6■□□□□ 0.41
PTPN1P18031 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.6■□□□□ 0.41
PTPN1P18031 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPN1P18031 AC008267.7-201ENST00000624570 1194 ntBASIC17.6■□□□□ 0.41
PTPN1P18031 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PTPN1P18031 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
PTPN1P18031 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN1P18031 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN1P18031 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms