Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CTPS1P17812 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.74■□□□□ 0.27
CTPS1P17812 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CTPS1P17812 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.74■□□□□ 0.27
CTPS1P17812 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CTPS1P17812 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 AC002056.1-201ENST00000395613 760 ntBASIC16.74■□□□□ 0.27
CTPS1P17812 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.74■□□□□ 0.27
CTPS1P17812 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.74■□□□□ 0.27
CTPS1P17812 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.74■□□□□ 0.27
CTPS1P17812 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CTPS1P17812 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.74■□□□□ 0.27
CTPS1P17812 AC099522.2-201ENST00000607001 744 ntBASIC16.74■□□□□ 0.27
CTPS1P17812 AC055717.3-201ENST00000622967 595 ntBASIC16.74■□□□□ 0.27
CTPS1P17812 AL139011.1-202ENST00000642063 584 ntBASIC16.74■□□□□ 0.27
CTPS1P17812 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CTPS1P17812 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CTPS1P17812 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CTPS1P17812 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.74■□□□□ 0.27
CTPS1P17812 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CTPS1P17812 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CTPS1P17812 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CTPS1P17812 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.74■□□□□ 0.27
CTPS1P17812 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS1P17812 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
CTPS1P17812 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
CTPS1P17812 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.73■□□□□ 0.27
CTPS1P17812 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CTPS1P17812 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.73■□□□□ 0.27
CTPS1P17812 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
CTPS1P17812 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.73■□□□□ 0.27
CTPS1P17812 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CTPS1P17812 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.73■□□□□ 0.27
CTPS1P17812 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.73■□□□□ 0.27
CTPS1P17812 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 PMS2P4-201ENST00000412466 1052 ntBASIC16.73■□□□□ 0.27
CTPS1P17812 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.73■□□□□ 0.27
CTPS1P17812 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.73■□□□□ 0.27
CTPS1P17812 AC092474.2-201ENST00000424288 719 ntBASIC16.73■□□□□ 0.27
CTPS1P17812 CEND1P1-201ENST00000451006 455 ntBASIC16.73■□□□□ 0.27
CTPS1P17812 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.73■□□□□ 0.27
CTPS1P17812 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.73■□□□□ 0.27
CTPS1P17812 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.73■□□□□ 0.27
CTPS1P17812 MIR4469-201ENST00000583919 79 ntBASIC16.73■□□□□ 0.27
CTPS1P17812 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.73■□□□□ 0.27
CTPS1P17812 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.73■□□□□ 0.27
CTPS1P17812 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS1P17812 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.72■□□□□ 0.27
CTPS1P17812 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CTPS1P17812 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.72■□□□□ 0.27
CTPS1P17812 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTPS1P17812 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.72■□□□□ 0.27
CTPS1P17812 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.72■□□□□ 0.27
CTPS1P17812 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CTPS1P17812 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTPS1P17812 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.72■□□□□ 0.27
CTPS1P17812 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTPS1P17812 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CTPS1P17812 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTPS1P17812 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTPS1P17812 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTPS1P17812 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.72■□□□□ 0.27
CTPS1P17812 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTPS1P17812 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTPS1P17812 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTPS1P17812 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTPS1P17812 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTPS1P17812 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CTPS1P17812 MIR1233-2-201ENST00000408138 82 ntBASIC16.72■□□□□ 0.27
CTPS1P17812 MIR1233-1-201ENST00000408722 82 ntBASIC16.72■□□□□ 0.27
CTPS1P17812 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.72■□□□□ 0.27
CTPS1P17812 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.72■□□□□ 0.27
CTPS1P17812 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.72■□□□□ 0.27
CTPS1P17812 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms