Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDGFRAP16234 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.49■□□□□ 0.39
PDGFRAP16234 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFRAP16234 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.49■□□□□ 0.39
PDGFRAP16234 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PDGFRAP16234 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PDGFRAP16234 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.49■□□□□ 0.39
PDGFRAP16234 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFRAP16234 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFRAP16234 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFRAP16234 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PDGFRAP16234 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PDGFRAP16234 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFRAP16234 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFRAP16234 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.48■□□□□ 0.39
PDGFRAP16234 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.48■□□□□ 0.39
PDGFRAP16234 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFRAP16234 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFRAP16234 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.48■□□□□ 0.39
PDGFRAP16234 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PDGFRAP16234 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
PDGFRAP16234 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.48■□□□□ 0.39
PDGFRAP16234 AC023141.13-201ENST00000604991 943 ntBASIC17.48■□□□□ 0.39
PDGFRAP16234 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFRAP16234 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.48■□□□□ 0.39
PDGFRAP16234 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.48■□□□□ 0.39
PDGFRAP16234 AC007064.4-201ENST00000637740 555 ntBASIC17.48■□□□□ 0.39
PDGFRAP16234 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDGFRAP16234 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFRAP16234 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFRAP16234 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDGFRAP16234 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFRAP16234 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFRAP16234 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFRAP16234 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFRAP16234 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFRAP16234 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFRAP16234 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.48■□□□□ 0.39
PDGFRAP16234 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFRAP16234 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.47■□□□□ 0.39
PDGFRAP16234 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PDGFRAP16234 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PDGFRAP16234 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.47■□□□□ 0.39
PDGFRAP16234 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 KRT18P13-201ENST00000400056 1290 ntBASIC17.47■□□□□ 0.39
PDGFRAP16234 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.47■□□□□ 0.39
PDGFRAP16234 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PDGFRAP16234 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.47■□□□□ 0.39
PDGFRAP16234 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.47■□□□□ 0.39
PDGFRAP16234 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PDGFRAP16234 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.47■□□□□ 0.39
PDGFRAP16234 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDGFRAP16234 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 AL662844.4-201ENST00000606367 2838 ntBASIC17.47■□□□□ 0.39
PDGFRAP16234 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PDGFRAP16234 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PDGFRAP16234 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.47■□□□□ 0.39
PDGFRAP16234 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 GGT4P-201ENST00000623672 1708 ntBASIC17.47■□□□□ 0.39
PDGFRAP16234 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFRAP16234 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PDGFRAP16234 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.46■□□□□ 0.39
PDGFRAP16234 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.46■□□□□ 0.39
PDGFRAP16234 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
PDGFRAP16234 GGT3P-204ENST00000453783 1664 ntBASIC17.46■□□□□ 0.39
PDGFRAP16234 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms