Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.53■□□□□ 0.4
RARAP10276 AL049840.3-201ENST00000602669 611 ntBASIC17.53■□□□□ 0.4
RARAP10276 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.53■□□□□ 0.4
RARAP10276 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RARAP10276 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RARAP10276 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.53■□□□□ 0.4
RARAP10276 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RARAP10276 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RARAP10276 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.53■□□□□ 0.4
RARAP10276 MTHFR-217ENST00000641820 1569 ntBASIC17.53■□□□□ 0.4
RARAP10276 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RARAP10276 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.53■□□□□ 0.4
RARAP10276 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.53■□□□□ 0.4
RARAP10276 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.53■□□□□ 0.4
RARAP10276 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RARAP10276 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RARAP10276 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.52■□□□□ 0.4
RARAP10276 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.52■□□□□ 0.4
RARAP10276 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.52■□□□□ 0.4
RARAP10276 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RARAP10276 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RARAP10276 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.52■□□□□ 0.4
RARAP10276 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
RARAP10276 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RARAP10276 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
RARAP10276 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.52■□□□□ 0.4
RARAP10276 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.52■□□□□ 0.4
RARAP10276 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.52■□□□□ 0.4
RARAP10276 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.52■□□□□ 0.4
RARAP10276 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.52■□□□□ 0.4
RARAP10276 AL139011.1-202ENST00000642063 584 ntBASIC17.52■□□□□ 0.4
RARAP10276 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.52■□□□□ 0.4
RARAP10276 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARAP10276 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RARAP10276 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.52■□□□□ 0.39
RARAP10276 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
RARAP10276 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RARAP10276 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RARAP10276 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RARAP10276 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RARAP10276 SLC22A20-204ENST00000530038 1673 ntBASIC17.52■□□□□ 0.39
RARAP10276 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.51■□□□□ 0.39
RARAP10276 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RARAP10276 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RARAP10276 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.51■□□□□ 0.39
RARAP10276 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.51■□□□□ 0.39
RARAP10276 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.51■□□□□ 0.39
RARAP10276 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.51■□□□□ 0.39
RARAP10276 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 MRPL3P1-201ENST00000400109 1033 ntBASIC17.51■□□□□ 0.39
RARAP10276 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.51■□□□□ 0.39
RARAP10276 AL031284.1-201ENST00000419297 478 ntBASIC17.51■□□□□ 0.39
RARAP10276 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RARAP10276 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 PMS2P1-201ENST00000431037 1228 ntBASIC17.51■□□□□ 0.39
RARAP10276 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.51■□□□□ 0.39
RARAP10276 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.51■□□□□ 0.39
RARAP10276 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.51■□□□□ 0.39
RARAP10276 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.51■□□□□ 0.39
RARAP10276 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.51■□□□□ 0.39
RARAP10276 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
RARAP10276 MIR7706-201ENST00000613747 67 ntBASIC17.51■□□□□ 0.39
RARAP10276 AL773604.1-201ENST00000617417 272 ntBASIC17.51■□□□□ 0.39
RARAP10276 AC005593.1-201ENST00000624894 515 ntBASIC17.51■□□□□ 0.39
RARAP10276 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.51■□□□□ 0.39
RARAP10276 PGM5P2-202ENST00000637225 1043 ntBASIC17.51■□□□□ 0.39
RARAP10276 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.51■□□□□ 0.39
RARAP10276 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.51■□□□□ 0.39
RARAP10276 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RARAP10276 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RARAP10276 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.51■□□□□ 0.39
RARAP10276 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARAP10276 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms