Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.17■□□□□ 0.18
SP9P0CG40 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SP9P0CG40 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 AC006277.1-201ENST00000624348 1610 ntBASIC16.17■□□□□ 0.18
SP9P0CG40 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.17■□□□□ 0.18
SP9P0CG40 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.17■□□□□ 0.18
SP9P0CG40 AC006033.1-201ENST00000440505 426 ntBASIC16.17■□□□□ 0.18
SP9P0CG40 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.17■□□□□ 0.18
SP9P0CG40 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.17■□□□□ 0.18
SP9P0CG40 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.17■□□□□ 0.18
SP9P0CG40 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.17■□□□□ 0.18
SP9P0CG40 AC036164.1-201ENST00000570544 333 ntBASIC16.17■□□□□ 0.18
SP9P0CG40 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.17■□□□□ 0.18
SP9P0CG40 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.17■□□□□ 0.18
SP9P0CG40 AC009542.2-202ENST00000619004 1067 ntBASIC16.17■□□□□ 0.18
SP9P0CG40 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 KRT8P39-201ENST00000396270 1433 ntBASIC16.17■□□□□ 0.18
SP9P0CG40 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SP9P0CG40 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SP9P0CG40 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.16■□□□□ 0.18
SP9P0CG40 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SP9P0CG40 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SP9P0CG40 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.16■□□□□ 0.18
SP9P0CG40 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 IGHJ2P-201ENST00000454480 60 ntBASIC16.16■□□□□ 0.18
SP9P0CG40 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.16■□□□□ 0.18
SP9P0CG40 AP001889.1-201ENST00000525414 633 ntBASIC16.16■□□□□ 0.18
SP9P0CG40 PTP4A1P2-201ENST00000546033 454 ntBASIC16.16■□□□□ 0.18
SP9P0CG40 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.16■□□□□ 0.18
SP9P0CG40 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.16■□□□□ 0.18
SP9P0CG40 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SP9P0CG40 RN7SL560P-201ENST00000577943 264 ntBASIC16.16■□□□□ 0.18
SP9P0CG40 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.16■□□□□ 0.18
SP9P0CG40 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 AC013467.2-201ENST00000605472 835 ntBASIC16.16■□□□□ 0.18
SP9P0CG40 AL118558.3-201ENST00000607414 1079 ntBASIC16.16■□□□□ 0.18
SP9P0CG40 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.16■□□□□ 0.18
SP9P0CG40 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.16■□□□□ 0.18
SP9P0CG40 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SP9P0CG40 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SP9P0CG40 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SP9P0CG40 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.16■□□□□ 0.18
SP9P0CG40 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.15■□□□□ 0.18
SP9P0CG40 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.15■□□□□ 0.18
SP9P0CG40 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SP9P0CG40 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.15■□□□□ 0.18
SP9P0CG40 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.15■□□□□ 0.18
SP9P0CG40 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.15■□□□□ 0.18
SP9P0CG40 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SP9P0CG40 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.15■□□□□ 0.18
SP9P0CG40 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SP9P0CG40 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.15■□□□□ 0.18
SP9P0CG40 FO393414.2-201ENST00000405153 598 ntBASIC16.15■□□□□ 0.18
SP9P0CG40 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.15■□□□□ 0.18
SP9P0CG40 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.15■□□□□ 0.18
SP9P0CG40 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.15■□□□□ 0.18
SP9P0CG40 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SP9P0CG40 AC068587.3-201ENST00000526613 355 ntBASIC16.15■□□□□ 0.18
SP9P0CG40 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SP9P0CG40 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.15■□□□□ 0.18
SP9P0CG40 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms