Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHGBP05060 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHGBP05060 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHGBP05060 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
CHGBP05060 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHGBP05060 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.95■□□□□ 0.78
CHGBP05060 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.95■□□□□ 0.78
CHGBP05060 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.95■□□□□ 0.78
CHGBP05060 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CHGBP05060 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.95■□□□□ 0.78
CHGBP05060 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.95■□□□□ 0.78
CHGBP05060 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHGBP05060 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.95■□□□□ 0.78
CHGBP05060 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHGBP05060 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CHGBP05060 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.95■□□□□ 0.78
CHGBP05060 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.95■□□□□ 0.78
CHGBP05060 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.95■□□□□ 0.78
CHGBP05060 AC021097.1-201ENST00000607902 574 ntBASIC19.95■□□□□ 0.78
CHGBP05060 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.95■□□□□ 0.78
CHGBP05060 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHGBP05060 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.95■□□□□ 0.78
CHGBP05060 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.95■□□□□ 0.78
CHGBP05060 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHGBP05060 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHGBP05060 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.94■□□□□ 0.78
CHGBP05060 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 AC073439.1-201ENST00000624121 1774 ntBASIC19.94■□□□□ 0.78
CHGBP05060 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.94■□□□□ 0.78
CHGBP05060 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHGBP05060 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.94■□□□□ 0.78
CHGBP05060 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 AL592309.1-201ENST00000443127 649 ntBASIC19.94■□□□□ 0.78
CHGBP05060 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.94■□□□□ 0.78
CHGBP05060 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHGBP05060 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.94■□□□□ 0.78
CHGBP05060 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CHGBP05060 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.94■□□□□ 0.78
CHGBP05060 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.94■□□□□ 0.78
CHGBP05060 AL161645.1-201ENST00000622716 1255 ntBASIC19.94■□□□□ 0.78
CHGBP05060 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CHGBP05060 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.94■□□□□ 0.78
CHGBP05060 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CHGBP05060 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHGBP05060 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHGBP05060 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHGBP05060 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHGBP05060 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHGBP05060 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHGBP05060 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CHGBP05060 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHGBP05060 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.93■□□□□ 0.78
CHGBP05060 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHGBP05060 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.93■□□□□ 0.78
CHGBP05060 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.93■□□□□ 0.78
CHGBP05060 AL627223.1-201ENST00000416693 442 ntBASIC19.93■□□□□ 0.78
CHGBP05060 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.93■□□□□ 0.78
CHGBP05060 HLA-J-202ENST00000469281 1241 ntBASIC19.93■□□□□ 0.78
CHGBP05060 AC109322.1-201ENST00000524499 1264 ntBASIC19.93■□□□□ 0.78
CHGBP05060 SNHG9-202ENST00000564014 471 ntBASIC19.93■□□□□ 0.78
CHGBP05060 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.93■□□□□ 0.78
CHGBP05060 AC027307.2-201ENST00000591252 911 ntBASIC19.93■□□□□ 0.78
CHGBP05060 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.93■□□□□ 0.78
CHGBP05060 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHGBP05060 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.93■□□□□ 0.78
CHGBP05060 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHGBP05060 AKAP8P1-201ENST00000434743 1349 ntBASIC19.93■□□□□ 0.78
CHGBP05060 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHGBP05060 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.93■□□□□ 0.78
CHGBP05060 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms