Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND3P03897 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
MT-ND3P03897 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND3P03897 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MT-ND3P03897 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND3P03897 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND3P03897 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
MT-ND3P03897 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MT-ND3P03897 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND3P03897 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MT-ND3P03897 HLA-A-201ENST00000376802 1334 ntBASIC17.05■□□□□ 0.32
MT-ND3P03897 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MT-ND3P03897 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MT-ND3P03897 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MT-ND3P03897 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MT-ND3P03897 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.05■□□□□ 0.32
MT-ND3P03897 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.05■□□□□ 0.32
MT-ND3P03897 AC132008.2-207ENST00000454517 770 ntBASIC17.05■□□□□ 0.32
MT-ND3P03897 SCARNA2-201ENST00000458748 420 ntBASIC17.05■□□□□ 0.32
MT-ND3P03897 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND3P03897 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND3P03897 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.05■□□□□ 0.32
MT-ND3P03897 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.05■□□□□ 0.32
MT-ND3P03897 AC008608.2-201ENST00000606089 416 ntBASIC17.05■□□□□ 0.32
MT-ND3P03897 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 BX640515.1-201ENST00000617215 977 ntBASIC17.05■□□□□ 0.32
MT-ND3P03897 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND3P03897 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.05■□□□□ 0.32
MT-ND3P03897 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND3P03897 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MT-ND3P03897 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 HYMAI-201ENST00000635591 3347 ntBASIC17.04■□□□□ 0.32
MT-ND3P03897 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.04■□□□□ 0.32
MT-ND3P03897 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MT-ND3P03897 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.04■□□□□ 0.32
MT-ND3P03897 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.04■□□□□ 0.32
MT-ND3P03897 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MT-ND3P03897 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.04■□□□□ 0.32
MT-ND3P03897 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.04■□□□□ 0.32
MT-ND3P03897 RCN1P2-201ENST00000398357 915 ntBASIC17.04■□□□□ 0.32
MT-ND3P03897 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.04■□□□□ 0.32
MT-ND3P03897 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 KRT18P67-201ENST00000432816 1264 ntBASIC17.04■□□□□ 0.32
MT-ND3P03897 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.04■□□□□ 0.32
MT-ND3P03897 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.04■□□□□ 0.32
MT-ND3P03897 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.04■□□□□ 0.32
MT-ND3P03897 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.04■□□□□ 0.32
MT-ND3P03897 AC073592.5-201ENST00000624854 528 ntBASIC17.04■□□□□ 0.32
MT-ND3P03897 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.04■□□□□ 0.32
MT-ND3P03897 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.04■□□□□ 0.32
MT-ND3P03897 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.04■□□□□ 0.32
MT-ND3P03897 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.04■□□□□ 0.32
MT-ND3P03897 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-ND3P03897 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 AC011270.2-201ENST00000624293 2550 ntBASIC17.03■□□□□ 0.32
MT-ND3P03897 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.03■□□□□ 0.32
MT-ND3P03897 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms