Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CHRNA1P02708 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.98■□□□□ 0.47
CHRNA1P02708 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CHRNA1P02708 AL589702.1-201ENST00000641229 1509 ntBASIC17.98■□□□□ 0.47
CHRNA1P02708 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.98■□□□□ 0.47
CHRNA1P02708 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CHRNA1P02708 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.98■□□□□ 0.47
CHRNA1P02708 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CHRNA1P02708 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.98■□□□□ 0.47
CHRNA1P02708 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.98■□□□□ 0.47
CHRNA1P02708 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.98■□□□□ 0.47
CHRNA1P02708 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.98■□□□□ 0.47
CHRNA1P02708 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.98■□□□□ 0.47
CHRNA1P02708 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.98■□□□□ 0.47
CHRNA1P02708 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.98■□□□□ 0.47
CHRNA1P02708 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.98■□□□□ 0.47
CHRNA1P02708 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.98■□□□□ 0.47
CHRNA1P02708 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.98■□□□□ 0.47
CHRNA1P02708 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.98■□□□□ 0.47
CHRNA1P02708 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CHRNA1P02708 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHRNA1P02708 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CHRNA1P02708 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 AC139713.2-201ENST00000641328 2723 ntBASIC17.98■□□□□ 0.47
CHRNA1P02708 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHRNA1P02708 AC060834.1-201ENST00000443027 2032 ntBASIC17.98■□□□□ 0.47
CHRNA1P02708 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA1P02708 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.98■□□□□ 0.47
CHRNA1P02708 AL023806.1-201ENST00000603994 1649 ntBASIC17.98■□□□□ 0.47
CHRNA1P02708 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHRNA1P02708 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHRNA1P02708 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHRNA1P02708 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.97■□□□□ 0.47
CHRNA1P02708 AC007541.1-201ENST00000570282 1469 ntBASIC17.97■□□□□ 0.47
CHRNA1P02708 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CHRNA1P02708 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHRNA1P02708 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.97■□□□□ 0.47
CHRNA1P02708 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRNA1P02708 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.97■□□□□ 0.47
CHRNA1P02708 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.97■□□□□ 0.47
CHRNA1P02708 API5-211ENST00000534695 560 ntTSL 5 BASIC17.97■□□□□ 0.47
CHRNA1P02708 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRNA1P02708 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.97■□□□□ 0.47
CHRNA1P02708 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRNA1P02708 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.97■□□□□ 0.47
CHRNA1P02708 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.97■□□□□ 0.47
CHRNA1P02708 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.97■□□□□ 0.47
CHRNA1P02708 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRNA1P02708 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRNA1P02708 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRNA1P02708 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA1P02708 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNA1P02708 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CHRNA1P02708 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.96■□□□□ 0.47
CHRNA1P02708 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CHRNA1P02708 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNA1P02708 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CHRNA1P02708 AL031731.1-201ENST00000642131 2094 ntBASIC17.96■□□□□ 0.47
CHRNA1P02708 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.96■□□□□ 0.47
CHRNA1P02708 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA1P02708 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.96■□□□□ 0.47
CHRNA1P02708 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHRNA1P02708 GNAQP1-201ENST00000444815 1067 ntBASIC17.96■□□□□ 0.47
CHRNA1P02708 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNA1P02708 MEIS3P1-201ENST00000495167 958 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms