Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 MCCD1P2-201ENST00000423228 335 ntBASIC17.89■□□□□ 0.45
HLA-DRAP01903 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
HLA-DRAP01903 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRAP01903 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 AC002056.1-201ENST00000395613 760 ntBASIC17.88■□□□□ 0.45
HLA-DRAP01903 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 AC099522.2-201ENST00000607001 744 ntBASIC17.88■□□□□ 0.45
HLA-DRAP01903 AC091812.2-201ENST00000619081 385 ntBASIC17.88■□□□□ 0.45
HLA-DRAP01903 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 PCGF3-213ENST00000620529 1899 ntBASIC17.88■□□□□ 0.45
HLA-DRAP01903 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DRAP01903 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DRAP01903 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DRAP01903 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DRAP01903 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DRAP01903 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DRAP01903 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HLA-DRAP01903 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 FAM58CP-201ENST00000435741 640 ntBASIC17.87■□□□□ 0.45
HLA-DRAP01903 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DRAP01903 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DRAP01903 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 AC020765.3-201ENST00000613051 740 ntBASIC17.87■□□□□ 0.45
HLA-DRAP01903 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DRAP01903 ME2P1-201ENST00000426028 1970 ntBASIC17.87■□□□□ 0.45
HLA-DRAP01903 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.87■□□□□ 0.45
HLA-DRAP01903 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DRAP01903 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DRAP01903 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms