Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.24□□□□□ -0.29
IFNA1P01562 AC024563.2-201ENST00000603282 481 ntBASIC13.24□□□□□ -0.29
IFNA1P01562 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
IFNA1P01562 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
IFNA1P01562 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.24□□□□□ -0.29
IFNA1P01562 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.24□□□□□ -0.29
IFNA1P01562 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.24□□□□□ -0.29
IFNA1P01562 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.24□□□□□ -0.29
IFNA1P01562 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
IFNA1P01562 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.24□□□□□ -0.29
IFNA1P01562 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
IFNA1P01562 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.23□□□□□ -0.29
IFNA1P01562 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.23□□□□□ -0.29
IFNA1P01562 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.23□□□□□ -0.29
IFNA1P01562 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.23□□□□□ -0.29
IFNA1P01562 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
IFNA1P01562 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
IFNA1P01562 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
IFNA1P01562 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.23□□□□□ -0.29
IFNA1P01562 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.23□□□□□ -0.29
IFNA1P01562 GGT4P-201ENST00000623672 1708 ntBASIC13.23□□□□□ -0.29
IFNA1P01562 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.23□□□□□ -0.29
IFNA1P01562 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.23□□□□□ -0.29
IFNA1P01562 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
IFNA1P01562 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.23□□□□□ -0.29
IFNA1P01562 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.23□□□□□ -0.29
IFNA1P01562 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.23□□□□□ -0.29
IFNA1P01562 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.23□□□□□ -0.29
IFNA1P01562 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 AC024243.1-201ENST00000609234 778 ntBASIC13.23□□□□□ -0.29
IFNA1P01562 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.23□□□□□ -0.29
IFNA1P01562 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
IFNA1P01562 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.23□□□□□ -0.29
IFNA1P01562 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.23□□□□□ -0.29
IFNA1P01562 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
IFNA1P01562 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.23□□□□□ -0.29
IFNA1P01562 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IFNA1P01562 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.22□□□□□ -0.29
IFNA1P01562 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
IFNA1P01562 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.22□□□□□ -0.29
IFNA1P01562 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.22□□□□□ -0.29
IFNA1P01562 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
IFNA1P01562 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.22□□□□□ -0.29
IFNA1P01562 COX5BP2-201ENST00000392354 334 ntBASIC13.22□□□□□ -0.29
IFNA1P01562 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.22□□□□□ -0.29
IFNA1P01562 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.22□□□□□ -0.29
IFNA1P01562 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.22□□□□□ -0.29
IFNA1P01562 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.22□□□□□ -0.29
IFNA1P01562 CCR12P-201ENST00000446203 998 ntBASIC13.22□□□□□ -0.29
IFNA1P01562 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.22□□□□□ -0.29
IFNA1P01562 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.22□□□□□ -0.29
IFNA1P01562 AC109462.3-201ENST00000573934 613 ntBASIC13.22□□□□□ -0.29
IFNA1P01562 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.22□□□□□ -0.29
IFNA1P01562 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms