Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MIR4515-201ENST00000584082 81 ntBASIC14.01□□□□□ -0.17
ABCA1O95477 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.01□□□□□ -0.17
ABCA1O95477 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.01□□□□□ -0.17
ABCA1O95477 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14□□□□□ -0.17
ABCA1O95477 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
ABCA1O95477 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14□□□□□ -0.17
ABCA1O95477 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ABCA1O95477 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14□□□□□ -0.17
ABCA1O95477 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ABCA1O95477 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ABCA1O95477 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ABCA1O95477 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14□□□□□ -0.17
ABCA1O95477 SPDYE14P-201ENST00000442619 822 ntBASIC14□□□□□ -0.17
ABCA1O95477 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14□□□□□ -0.17
ABCA1O95477 RN7SL692P-201ENST00000464677 288 ntBASIC14□□□□□ -0.17
ABCA1O95477 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14□□□□□ -0.17
ABCA1O95477 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14□□□□□ -0.17
ABCA1O95477 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14□□□□□ -0.17
ABCA1O95477 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
ABCA1O95477 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14□□□□□ -0.17
ABCA1O95477 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ABCA1O95477 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
ABCA1O95477 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ABCA1O95477 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14□□□□□ -0.17
ABCA1O95477 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ABCA1O95477 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14□□□□□ -0.17
ABCA1O95477 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ABCA1O95477 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCA1O95477 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCA1O95477 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.99□□□□□ -0.17
ABCA1O95477 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.99□□□□□ -0.17
ABCA1O95477 SPDYE22P-201ENST00000582158 798 ntBASIC13.99□□□□□ -0.17
ABCA1O95477 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCA1O95477 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ABCA1O95477 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ABCA1O95477 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
ABCA1O95477 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ABCA1O95477 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCA1O95477 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCA1O95477 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ABCA1O95477 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCA1O95477 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.99□□□□□ -0.17
ABCA1O95477 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ABCA1O95477 MRPS18AP1-201ENST00000414458 589 ntBASIC13.99□□□□□ -0.17
ABCA1O95477 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.99□□□□□ -0.17
ABCA1O95477 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCA1O95477 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCA1O95477 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.99□□□□□ -0.17
ABCA1O95477 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCA1O95477 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.99□□□□□ -0.17
ABCA1O95477 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ABCA1O95477 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ABCA1O95477 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ABCA1O95477 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ABCA1O95477 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms