Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.54■□□□□ 0.56
CLSTN1O94985 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
CLSTN1O94985 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CLSTN1O94985 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CLSTN1O94985 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLSTN1O94985 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CLSTN1O94985 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.53■□□□□ 0.56
CLSTN1O94985 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.53■□□□□ 0.56
CLSTN1O94985 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.53■□□□□ 0.56
CLSTN1O94985 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CLSTN1O94985 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CLSTN1O94985 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.53■□□□□ 0.56
CLSTN1O94985 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLSTN1O94985 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLSTN1O94985 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.53■□□□□ 0.56
CLSTN1O94985 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.52■□□□□ 0.56
CLSTN1O94985 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLSTN1O94985 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.52■□□□□ 0.56
CLSTN1O94985 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.52■□□□□ 0.56
CLSTN1O94985 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLSTN1O94985 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.52■□□□□ 0.56
CLSTN1O94985 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLSTN1O94985 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.52■□□□□ 0.56
CLSTN1O94985 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLSTN1O94985 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLSTN1O94985 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CLSTN1O94985 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
CLSTN1O94985 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLSTN1O94985 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLSTN1O94985 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLSTN1O94985 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLSTN1O94985 HNRNPDP1-201ENST00000439535 754 ntBASIC18.52■□□□□ 0.56
CLSTN1O94985 PRYP5-201ENST00000451909 266 ntBASIC18.52■□□□□ 0.56
CLSTN1O94985 AC018712.1-201ENST00000455767 687 ntBASIC18.52■□□□□ 0.56
CLSTN1O94985 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.52■□□□□ 0.56
CLSTN1O94985 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.52■□□□□ 0.56
CLSTN1O94985 AC105339.3-201ENST00000560043 636 ntBASIC18.52■□□□□ 0.56
CLSTN1O94985 AC104692.2-201ENST00000603054 253 ntBASIC18.52■□□□□ 0.56
CLSTN1O94985 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.52■□□□□ 0.56
CLSTN1O94985 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.52■□□□□ 0.56
CLSTN1O94985 AC005593.1-201ENST00000624894 515 ntBASIC18.52■□□□□ 0.56
CLSTN1O94985 FAM215A-202ENST00000632077 792 ntBASIC18.52■□□□□ 0.56
CLSTN1O94985 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CLSTN1O94985 AC116353.5-201ENST00000638148 1699 ntBASIC18.52■□□□□ 0.56
CLSTN1O94985 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.52■□□□□ 0.56
CLSTN1O94985 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLSTN1O94985 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CLSTN1O94985 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLSTN1O94985 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CLSTN1O94985 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLSTN1O94985 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CLSTN1O94985 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLSTN1O94985 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLSTN1O94985 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.52■□□□□ 0.55
CLSTN1O94985 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLSTN1O94985 AP002414.3-201ENST00000589352 1468 ntBASIC18.52■□□□□ 0.55
CLSTN1O94985 PI4KAP1-204ENST00000612579 1703 ntBASIC18.52■□□□□ 0.55
CLSTN1O94985 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CLSTN1O94985 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLSTN1O94985 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLSTN1O94985 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLSTN1O94985 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLSTN1O94985 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CLSTN1O94985 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLSTN1O94985 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLSTN1O94985 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLSTN1O94985 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.51■□□□□ 0.55
CLSTN1O94985 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC18.51■□□□□ 0.55
CLSTN1O94985 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLSTN1O94985 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.51■□□□□ 0.55
CLSTN1O94985 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLSTN1O94985 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.51■□□□□ 0.55
CLSTN1O94985 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.51■□□□□ 0.55
CLSTN1O94985 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.51■□□□□ 0.55
CLSTN1O94985 SLC25A6P4-201ENST00000586535 553 ntBASIC18.51■□□□□ 0.55
CLSTN1O94985 AL049840.3-201ENST00000602669 611 ntBASIC18.51■□□□□ 0.55
CLSTN1O94985 AC008735.5-201ENST00000623544 497 ntBASIC18.51■□□□□ 0.55
CLSTN1O94985 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLSTN1O94985 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.51■□□□□ 0.55
CLSTN1O94985 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CLSTN1O94985 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.51■□□□□ 0.55
CLSTN1O94985 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.51■□□□□ 0.55
CLSTN1O94985 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms