Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.15□□□□□ -0.3
CUBNO60494 AC061975.2-201ENST00000581722 295 ntBASIC13.15□□□□□ -0.3
CUBNO60494 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.15□□□□□ -0.3
CUBNO60494 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.15□□□□□ -0.3
CUBNO60494 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 AC006538.1-201ENST00000567905 1585 ntBASIC13.15□□□□□ -0.3
CUBNO60494 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.15□□□□□ -0.3
CUBNO60494 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CUBNO60494 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CUBNO60494 BRWD1P1-201ENST00000401091 371 ntBASIC13.15□□□□□ -0.3
CUBNO60494 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.15□□□□□ -0.3
CUBNO60494 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.15□□□□□ -0.3
CUBNO60494 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.15□□□□□ -0.3
CUBNO60494 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.15□□□□□ -0.3
CUBNO60494 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.15□□□□□ -0.3
CUBNO60494 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.15□□□□□ -0.3
CUBNO60494 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.15□□□□□ -0.3
CUBNO60494 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CUBNO60494 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CUBNO60494 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.15□□□□□ -0.3
CUBNO60494 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CUBNO60494 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
CUBNO60494 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.15□□□□□ -0.31
CUBNO60494 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.14□□□□□ -0.31
CUBNO60494 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.14□□□□□ -0.31
CUBNO60494 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CUBNO60494 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.14□□□□□ -0.31
CUBNO60494 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.14□□□□□ -0.31
CUBNO60494 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.14□□□□□ -0.31
CUBNO60494 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
CUBNO60494 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.14□□□□□ -0.31
CUBNO60494 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 AC092506.1-202ENST00000401022 528 ntBASIC13.14□□□□□ -0.31
CUBNO60494 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.14□□□□□ -0.31
CUBNO60494 TPRX2P-201ENST00000535362 881 ntBASIC13.14□□□□□ -0.31
CUBNO60494 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.14□□□□□ -0.31
CUBNO60494 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.14□□□□□ -0.31
CUBNO60494 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.14□□□□□ -0.31
CUBNO60494 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.14□□□□□ -0.31
CUBNO60494 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.14□□□□□ -0.31
CUBNO60494 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.14□□□□□ -0.31
CUBNO60494 TOP3BP1-201ENST00000420768 1380 ntBASIC13.14□□□□□ -0.31
CUBNO60494 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CUBNO60494 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CUBNO60494 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.14□□□□□ -0.31
CUBNO60494 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.14□□□□□ -0.31
CUBNO60494 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 MIR3615-201ENST00000581999 87 ntBASIC13.14□□□□□ -0.31
CUBNO60494 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CUBNO60494 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 PCDHB17P-201ENST00000539533 2393 ntBASIC13.14□□□□□ -0.31
CUBNO60494 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.14□□□□□ -0.31
CUBNO60494 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CUBNO60494 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.13□□□□□ -0.31
CUBNO60494 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CUBNO60494 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.13□□□□□ -0.31
CUBNO60494 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.13□□□□□ -0.31
CUBNO60494 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 RN7SL190P-201ENST00000582519 257 ntBASIC13.13□□□□□ -0.31
CUBNO60494 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.13□□□□□ -0.31
CUBNO60494 AC025048.3-201ENST00000590609 569 ntBASIC13.13□□□□□ -0.31
CUBNO60494 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CUBNO60494 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CUBNO60494 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CUBNO60494 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.13□□□□□ -0.31
CUBNO60494 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CUBNO60494 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.13□□□□□ -0.31
CUBNO60494 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.13□□□□□ -0.31
CUBNO60494 CTBP2P5-201ENST00000454986 1264 ntBASIC13.13□□□□□ -0.31
CUBNO60494 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms