Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AL353705.2-201ENST00000428243 662 ntBASIC15.91■□□□□ 0.14
DUX1O43812 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.91■□□□□ 0.14
DUX1O43812 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.91■□□□□ 0.14
DUX1O43812 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.91■□□□□ 0.14
DUX1O43812 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.91■□□□□ 0.14
DUX1O43812 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.91■□□□□ 0.14
DUX1O43812 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.91■□□□□ 0.14
DUX1O43812 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DUX1O43812 AC007967.4-201ENST00000614700 386 ntBASIC15.91■□□□□ 0.14
DUX1O43812 SPTSSB-204ENST00000617024 1292 ntBASIC15.91■□□□□ 0.14
DUX1O43812 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX1O43812 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX1O43812 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.91■□□□□ 0.14
DUX1O43812 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
DUX1O43812 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.91■□□□□ 0.14
DUX1O43812 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX1O43812 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX1O43812 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX1O43812 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX1O43812 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.91■□□□□ 0.14
DUX1O43812 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.9■□□□□ 0.14
DUX1O43812 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
DUX1O43812 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
DUX1O43812 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.9■□□□□ 0.14
DUX1O43812 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.9■□□□□ 0.14
DUX1O43812 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.9■□□□□ 0.14
DUX1O43812 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
DUX1O43812 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.9■□□□□ 0.14
DUX1O43812 AC097493.3-201ENST00000509725 367 ntBASIC15.9■□□□□ 0.14
DUX1O43812 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
DUX1O43812 AC073592.8-201ENST00000624126 511 ntBASIC15.9■□□□□ 0.14
DUX1O43812 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.9■□□□□ 0.14
DUX1O43812 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.9■□□□□ 0.14
DUX1O43812 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DUX1O43812 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
DUX1O43812 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
DUX1O43812 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.89■□□□□ 0.13
DUX1O43812 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.89■□□□□ 0.13
DUX1O43812 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
DUX1O43812 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
DUX1O43812 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 FAM220BP-201ENST00000377689 816 ntBASIC15.89■□□□□ 0.13
DUX1O43812 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.89■□□□□ 0.13
DUX1O43812 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 AC098859.1-201ENST00000502915 1238 ntBASIC15.89■□□□□ 0.13
DUX1O43812 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.89■□□□□ 0.13
DUX1O43812 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.89■□□□□ 0.13
DUX1O43812 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 AC020765.3-201ENST00000613051 740 ntBASIC15.89■□□□□ 0.13
DUX1O43812 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
DUX1O43812 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
DUX1O43812 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.89■□□□□ 0.13
DUX1O43812 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.89■□□□□ 0.13
DUX1O43812 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DUX1O43812 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
DUX1O43812 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.89■□□□□ 0.13
DUX1O43812 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
DUX1O43812 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
DUX1O43812 AC139713.2-201ENST00000641328 2723 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms