Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.55□□□□□ -0.4
SNAI2O43623 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SNAI2O43623 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SNAI2O43623 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.55□□□□□ -0.4
SNAI2O43623 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.55□□□□□ -0.4
SNAI2O43623 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 AC092597.1-201ENST00000487352 616 ntBASIC12.55□□□□□ -0.4
SNAI2O43623 COX11P1-201ENST00000489116 835 ntBASIC12.55□□□□□ -0.4
SNAI2O43623 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.55□□□□□ -0.4
SNAI2O43623 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.55□□□□□ -0.4
SNAI2O43623 AC092364.2-201ENST00000596710 2692 ntBASIC12.55□□□□□ -0.4
SNAI2O43623 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 OR2I1P-210ENST00000642037 4691 ntBASIC12.55□□□□□ -0.4
SNAI2O43623 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.55□□□□□ -0.4
SNAI2O43623 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNAI2O43623 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
SNAI2O43623 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.55□□□□□ -0.4
SNAI2O43623 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 AL135999.2-201ENST00000622438 1686 ntBASIC12.54□□□□□ -0.4
SNAI2O43623 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.54□□□□□ -0.4
SNAI2O43623 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.54□□□□□ -0.4
SNAI2O43623 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.54□□□□□ -0.4
SNAI2O43623 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.54□□□□□ -0.4
SNAI2O43623 AP006294.2-201ENST00000641667 209 ntBASIC12.54□□□□□ -0.4
SNAI2O43623 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 ST20-AS1-201ENST00000560255 4223 ntBASIC12.54□□□□□ -0.4
SNAI2O43623 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.54□□□□□ -0.4
SNAI2O43623 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNAI2O43623 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.54□□□□□ -0.4
SNAI2O43623 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SNAI2O43623 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.54□□□□□ -0.4
SNAI2O43623 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 AC104581.4-201ENST00000623126 3052 ntBASIC12.53□□□□□ -0.4
SNAI2O43623 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.53□□□□□ -0.4
SNAI2O43623 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SNAI2O43623 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 AL391256.1-201ENST00000443260 1855 ntBASIC12.53□□□□□ -0.4
SNAI2O43623 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.53□□□□□ -0.4
SNAI2O43623 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SNAI2O43623 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.53□□□□□ -0.4
SNAI2O43623 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.53□□□□□ -0.4
SNAI2O43623 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SNAI2O43623 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms