Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPTBN2O15020 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SPTBN2O15020 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
SPTBN2O15020 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
SPTBN2O15020 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SPTBN2O15020 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPTBN2O15020 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SPTBN2O15020 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.71■□□□□ 0.11
SPTBN2O15020 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPTBN2O15020 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.71■□□□□ 0.11
SPTBN2O15020 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.71■□□□□ 0.11
SPTBN2O15020 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPTBN2O15020 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.71■□□□□ 0.11
SPTBN2O15020 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.71■□□□□ 0.11
SPTBN2O15020 SCARNA20.5-201ENST00000516991 142 ntBASIC15.71■□□□□ 0.11
SPTBN2O15020 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.71■□□□□ 0.11
SPTBN2O15020 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.71■□□□□ 0.11
SPTBN2O15020 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPTBN2O15020 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.71■□□□□ 0.11
SPTBN2O15020 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.71■□□□□ 0.11
SPTBN2O15020 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPTBN2O15020 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPTBN2O15020 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
SPTBN2O15020 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPTBN2O15020 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.71■□□□□ 0.1
SPTBN2O15020 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPTBN2O15020 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
SPTBN2O15020 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.71■□□□□ 0.1
SPTBN2O15020 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPTBN2O15020 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.7■□□□□ 0.1
SPTBN2O15020 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SPTBN2O15020 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.7■□□□□ 0.1
SPTBN2O15020 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.7■□□□□ 0.1
SPTBN2O15020 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.7■□□□□ 0.1
SPTBN2O15020 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.7■□□□□ 0.1
SPTBN2O15020 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.7■□□□□ 0.1
SPTBN2O15020 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SPTBN2O15020 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SPTBN2O15020 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.7■□□□□ 0.1
SPTBN2O15020 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SPTBN2O15020 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.7■□□□□ 0.1
SPTBN2O15020 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SPTBN2O15020 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.7■□□□□ 0.1
SPTBN2O15020 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.7■□□□□ 0.1
SPTBN2O15020 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.7■□□□□ 0.1
SPTBN2O15020 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 EGFEM1P-202ENST00000431685 1563 ntBASIC15.7■□□□□ 0.1
SPTBN2O15020 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.7■□□□□ 0.1
SPTBN2O15020 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.7■□□□□ 0.1
SPTBN2O15020 MIR4492-201ENST00000581627 80 ntBASIC15.7■□□□□ 0.1
SPTBN2O15020 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.7■□□□□ 0.1
SPTBN2O15020 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPTBN2O15020 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.69■□□□□ 0.1
SPTBN2O15020 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SPTBN2O15020 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.69■□□□□ 0.1
SPTBN2O15020 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.69■□□□□ 0.1
SPTBN2O15020 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.69■□□□□ 0.1
SPTBN2O15020 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.69■□□□□ 0.1
SPTBN2O15020 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.69■□□□□ 0.1
SPTBN2O15020 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.69■□□□□ 0.1
SPTBN2O15020 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.69■□□□□ 0.1
SPTBN2O15020 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.69■□□□□ 0.1
SPTBN2O15020 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SPTBN2O15020 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SPTBN2O15020 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPTBN2O15020 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.69■□□□□ 0.1
SPTBN2O15020 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.69■□□□□ 0.1
SPTBN2O15020 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.69■□□□□ 0.1
SPTBN2O15020 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms