Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 YBX1P5-201ENST00000509441 847 ntBASIC15.95■□□□□ 0.14
PCDH17O14917 KRT19P2-202ENST00000557173 1012 ntBASIC15.95■□□□□ 0.14
PCDH17O14917 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
PCDH17O14917 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH17O14917 AC005412.3-201ENST00000580309 715 ntBASIC15.95■□□□□ 0.14
PCDH17O14917 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH17O14917 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH17O14917 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDH17O14917 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDH17O14917 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH17O14917 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH17O14917 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDH17O14917 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH17O14917 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDH17O14917 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDH17O14917 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH17O14917 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH17O14917 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH17O14917 BCAR1-209ENST00000546196 1340 ntBASIC15.94■□□□□ 0.14
PCDH17O14917 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
PCDH17O14917 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH17O14917 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH17O14917 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH17O14917 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDH17O14917 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 AC074386.1-202ENST00000463561 864 ntBASIC15.94■□□□□ 0.14
PCDH17O14917 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDH17O14917 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDH17O14917 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH17O14917 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH17O14917 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDH17O14917 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH17O14917 AC134684.3-201ENST00000641758 218 ntBASIC15.94■□□□□ 0.14
PCDH17O14917 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
PCDH17O14917 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH17O14917 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 EGFEM1P-202ENST00000431685 1563 ntBASIC15.94■□□□□ 0.14
PCDH17O14917 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDH17O14917 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH17O14917 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDH17O14917 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH17O14917 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH17O14917 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDH17O14917 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDH17O14917 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH17O14917 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH17O14917 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH17O14917 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PCDH17O14917 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH17O14917 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH17O14917 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PCDH17O14917 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PCDH17O14917 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
PCDH17O14917 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
PCDH17O14917 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDH17O14917 AP006288.1-201ENST00000446065 395 ntBASIC15.93■□□□□ 0.14
PCDH17O14917 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH17O14917 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH17O14917 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDH17O14917 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDH17O14917 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH17O14917 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH17O14917 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
PCDH17O14917 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms