Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHD1O14646 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC26.37■■□□□ 1.81
CHD1O14646 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC26.37■■□□□ 1.81
CHD1O14646 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD1O14646 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD1O14646 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHD1O14646 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD1O14646 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC26.37■■□□□ 1.81
CHD1O14646 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC26.37■■□□□ 1.81
CHD1O14646 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
CHD1O14646 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC26.37■■□□□ 1.81
CHD1O14646 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC26.36■■□□□ 1.81
CHD1O14646 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CHD1O14646 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC26.36■■□□□ 1.81
CHD1O14646 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CHD1O14646 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CHD1O14646 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC26.36■■□□□ 1.81
CHD1O14646 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC26.36■■□□□ 1.81
CHD1O14646 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 AC018735.1-201ENST00000437208 1502 ntBASIC26.36■■□□□ 1.81
CHD1O14646 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD1O14646 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CHD1O14646 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1O14646 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1O14646 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD1O14646 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1O14646 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1O14646 FO393414.2-201ENST00000405153 598 ntBASIC26.35■■□□□ 1.81
CHD1O14646 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1O14646 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CHD1O14646 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC26.35■■□□□ 1.81
CHD1O14646 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC26.35■■□□□ 1.81
CHD1O14646 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD1O14646 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CHD1O14646 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC26.35■■□□□ 1.81
CHD1O14646 METTL26-214ENST00000614890 801 ntTSL 3 BASIC26.35■■□□□ 1.81
CHD1O14646 AP003419.4-201ENST00000616071 517 ntBASIC26.35■■□□□ 1.81
CHD1O14646 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1O14646 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1O14646 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1O14646 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1O14646 RERG-209ENST00000546331 1383 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD1O14646 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD1O14646 TUBB8P12-201ENST00000308911 1335 ntBASIC26.34■■□□□ 1.81
CHD1O14646 TUBB7P-202ENST00000428444 1305 ntBASIC26.34■■□□□ 1.81
CHD1O14646 TUBB8P7-204ENST00000567960 1332 ntBASIC26.34■■□□□ 1.81
CHD1O14646 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC26.34■■□□□ 1.81
CHD1O14646 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
CHD1O14646 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1O14646 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1O14646 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1O14646 FTLP10-202ENST00000505798 471 ntBASIC26.34■■□□□ 1.81
CHD1O14646 ENPP7P5-201ENST00000541031 1031 ntBASIC26.34■■□□□ 1.81
CHD1O14646 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1O14646 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC26.34■■□□□ 1.81
CHD1O14646 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
CHD1O14646 AC018635.2-201ENST00000608625 364 ntBASIC26.34■■□□□ 1.81
CHD1O14646 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC26.34■■□□□ 1.81
CHD1O14646 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC26.34■■□□□ 1.81
CHD1O14646 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC26.34■■□□□ 1.81
CHD1O14646 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1O14646 AC006277.1-201ENST00000624348 1610 ntBASIC26.34■■□□□ 1.81
CHD1O14646 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC26.34■■□□□ 1.81
CHD1O14646 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1O14646 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1O14646 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CHD1O14646 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CHD1O14646 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1O14646 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC26.34■■□□□ 1.81
CHD1O14646 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1O14646 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD1O14646 GRN-214ENST00000589265 1632 ntTSL 5 BASIC26.33■■□□□ 1.81
CHD1O14646 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CHD1O14646 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC26.33■■□□□ 1.81
CHD1O14646 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHD1O14646 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD1O14646 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CHD1O14646 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC26.33■■□□□ 1.81
CHD1O14646 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
CHD1O14646 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD1O14646 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD1O14646 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHD1O14646 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC26.33■■□□□ 1.81
CHD1O14646 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
CHD1O14646 AC022137.2-201ENST00000503482 481 ntBASIC26.33■■□□□ 1.81
CHD1O14646 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC26.33■■□□□ 1.81
CHD1O14646 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms