Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC7O00311 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC7O00311 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.37■□□□□ 0.21
CDC7O00311 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CDC7O00311 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.37■□□□□ 0.21
CDC7O00311 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.37■□□□□ 0.21
CDC7O00311 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDC7O00311 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDC7O00311 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
CDC7O00311 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.37■□□□□ 0.21
CDC7O00311 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.37■□□□□ 0.21
CDC7O00311 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.37■□□□□ 0.21
CDC7O00311 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.37■□□□□ 0.21
CDC7O00311 AC098831.1-202ENST00000438821 336 ntBASIC16.37■□□□□ 0.21
CDC7O00311 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.37■□□□□ 0.21
CDC7O00311 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.37■□□□□ 0.21
CDC7O00311 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.37■□□□□ 0.21
CDC7O00311 ACTL9-202ENST00000612068 1252 ntBASIC16.37■□□□□ 0.21
CDC7O00311 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.37■□□□□ 0.21
CDC7O00311 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.37■□□□□ 0.21
CDC7O00311 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDC7O00311 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
CDC7O00311 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.37■□□□□ 0.21
CDC7O00311 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.37■□□□□ 0.21
CDC7O00311 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC7O00311 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
CDC7O00311 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 HCG4-201ENST00000418983 998 ntBASIC16.36■□□□□ 0.21
CDC7O00311 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.36■□□□□ 0.21
CDC7O00311 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 AC108751.1-201ENST00000490852 363 ntBASIC16.36■□□□□ 0.21
CDC7O00311 RNA5SP419-201ENST00000515908 135 ntBASIC16.36■□□□□ 0.21
CDC7O00311 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.36■□□□□ 0.21
CDC7O00311 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.36■□□□□ 0.21
CDC7O00311 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.36■□□□□ 0.21
CDC7O00311 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.36■□□□□ 0.21
CDC7O00311 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 AC116407.3-201ENST00000623905 1129 ntBASIC16.36■□□□□ 0.21
CDC7O00311 AP001350.2-201ENST00000625104 1094 ntBASIC16.36■□□□□ 0.21
CDC7O00311 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDC7O00311 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.36■□□□□ 0.21
CDC7O00311 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 GPAA1P2-202ENST00000606848 1787 ntBASIC16.36■□□□□ 0.21
CDC7O00311 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.36■□□□□ 0.21
CDC7O00311 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDC7O00311 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms