Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.44■□□□□ 0.22
CACNB4O00305 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.44■□□□□ 0.22
CACNB4O00305 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.44■□□□□ 0.22
CACNB4O00305 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.44■□□□□ 0.22
CACNB4O00305 CYMP-203ENST00000474680 1263 ntBASIC16.44■□□□□ 0.22
CACNB4O00305 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.44■□□□□ 0.22
CACNB4O00305 AC109322.1-201ENST00000524499 1264 ntBASIC16.44■□□□□ 0.22
CACNB4O00305 LINC01225-203ENST00000563550 1244 ntBASIC16.44■□□□□ 0.22
CACNB4O00305 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 AC027307.2-201ENST00000591252 911 ntBASIC16.44■□□□□ 0.22
CACNB4O00305 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.44■□□□□ 0.22
CACNB4O00305 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CACNB4O00305 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CACNB4O00305 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CACNB4O00305 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CACNB4O00305 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.44■□□□□ 0.22
CACNB4O00305 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 KRT8P39-201ENST00000396270 1433 ntBASIC16.44■□□□□ 0.22
CACNB4O00305 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.44■□□□□ 0.22
CACNB4O00305 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.44■□□□□ 0.22
CACNB4O00305 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CACNB4O00305 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.44■□□□□ 0.22
CACNB4O00305 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.44■□□□□ 0.22
CACNB4O00305 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CACNB4O00305 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CACNB4O00305 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.43■□□□□ 0.22
CACNB4O00305 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CACNB4O00305 AC060834.1-201ENST00000443027 2032 ntBASIC16.43■□□□□ 0.22
CACNB4O00305 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.43■□□□□ 0.22
CACNB4O00305 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CACNB4O00305 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.43■□□□□ 0.22
CACNB4O00305 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CACNB4O00305 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CACNB4O00305 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CACNB4O00305 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CACNB4O00305 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CACNB4O00305 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CACNB4O00305 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.43■□□□□ 0.22
CACNB4O00305 RBPMS2P1-201ENST00000437762 623 ntBASIC16.43■□□□□ 0.22
CACNB4O00305 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CACNB4O00305 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CACNB4O00305 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.43■□□□□ 0.22
CACNB4O00305 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.43■□□□□ 0.22
CACNB4O00305 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.43■□□□□ 0.22
CACNB4O00305 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.43■□□□□ 0.22
CACNB4O00305 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.43■□□□□ 0.22
CACNB4O00305 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.43■□□□□ 0.22
CACNB4O00305 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.43■□□□□ 0.22
CACNB4O00305 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CACNB4O00305 AC106820.2-201ENST00000563775 3264 ntBASIC16.43■□□□□ 0.22
CACNB4O00305 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CACNB4O00305 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CACNB4O00305 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CACNB4O00305 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CACNB4O00305 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CACNB4O00305 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CACNB4O00305 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.42■□□□□ 0.22
CACNB4O00305 AL671710.1-201ENST00000610245 2349 ntBASIC16.42■□□□□ 0.22
CACNB4O00305 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CACNB4O00305 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CACNB4O00305 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.42■□□□□ 0.22
CACNB4O00305 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.42■□□□□ 0.22
CACNB4O00305 FAM58DP-201ENST00000428076 619 ntBASIC16.42■□□□□ 0.22
CACNB4O00305 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CACNB4O00305 FAM86GP-201ENST00000448322 971 ntBASIC16.42■□□□□ 0.22
CACNB4O00305 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.42■□□□□ 0.22
CACNB4O00305 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.42■□□□□ 0.22
CACNB4O00305 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.42■□□□□ 0.22
CACNB4O00305 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.42■□□□□ 0.22
CACNB4O00305 AL139011.1-202ENST00000642063 584 ntBASIC16.42■□□□□ 0.22
CACNB4O00305 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms