Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.95■□□□□ 0.14
PDLIM1O00151 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PDLIM1O00151 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.95■□□□□ 0.14
PDLIM1O00151 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.95■□□□□ 0.14
PDLIM1O00151 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 MTHFR-217ENST00000641820 1569 ntBASIC15.95■□□□□ 0.14
PDLIM1O00151 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PDLIM1O00151 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.95■□□□□ 0.14
PDLIM1O00151 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PDLIM1O00151 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PDLIM1O00151 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.94■□□□□ 0.14
PDLIM1O00151 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.94■□□□□ 0.14
PDLIM1O00151 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.94■□□□□ 0.14
PDLIM1O00151 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PDLIM1O00151 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.94■□□□□ 0.14
PDLIM1O00151 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.94■□□□□ 0.14
PDLIM1O00151 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.94■□□□□ 0.14
PDLIM1O00151 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.94■□□□□ 0.14
PDLIM1O00151 MIR3180-1-201ENST00000580374 94 ntBASIC15.94■□□□□ 0.14
PDLIM1O00151 AC090616.6-201ENST00000582640 721 ntBASIC15.94■□□□□ 0.14
PDLIM1O00151 MIR3180-3-201ENST00000584616 94 ntBASIC15.94■□□□□ 0.14
PDLIM1O00151 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.94■□□□□ 0.14
PDLIM1O00151 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.94■□□□□ 0.14
PDLIM1O00151 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
PDLIM1O00151 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.94■□□□□ 0.14
PDLIM1O00151 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PDLIM1O00151 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PDLIM1O00151 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PDLIM1O00151 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PDLIM1O00151 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM1O00151 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.93■□□□□ 0.14
PDLIM1O00151 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PDLIM1O00151 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
PDLIM1O00151 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
PDLIM1O00151 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.93■□□□□ 0.14
PDLIM1O00151 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.93■□□□□ 0.14
PDLIM1O00151 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.93■□□□□ 0.14
PDLIM1O00151 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.93■□□□□ 0.14
PDLIM1O00151 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PDLIM1O00151 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PDLIM1O00151 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.93■□□□□ 0.14
PDLIM1O00151 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDLIM1O00151 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PDLIM1O00151 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms