Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.73■□□□□ 0.59
DDX39AO00148 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX39AO00148 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
DDX39AO00148 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
DDX39AO00148 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.72■□□□□ 0.59
DDX39AO00148 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
DDX39AO00148 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX39AO00148 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
DDX39AO00148 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.72■□□□□ 0.59
DDX39AO00148 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.72■□□□□ 0.59
DDX39AO00148 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX39AO00148 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX39AO00148 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.72■□□□□ 0.59
DDX39AO00148 AC109322.1-201ENST00000524499 1264 ntBASIC18.72■□□□□ 0.59
DDX39AO00148 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.72■□□□□ 0.59
DDX39AO00148 AC004449.1-201ENST00000564240 433 ntBASIC18.72■□□□□ 0.59
DDX39AO00148 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.72■□□□□ 0.59
DDX39AO00148 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.72■□□□□ 0.59
DDX39AO00148 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.72■□□□□ 0.59
DDX39AO00148 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX39AO00148 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
DDX39AO00148 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX39AO00148 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
DDX39AO00148 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX39AO00148 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX39AO00148 AC078925.2-201ENST00000624013 1973 ntBASIC18.72■□□□□ 0.59
DDX39AO00148 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.71■□□□□ 0.59
DDX39AO00148 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX39AO00148 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX39AO00148 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.71■□□□□ 0.59
DDX39AO00148 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.71■□□□□ 0.59
DDX39AO00148 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.71■□□□□ 0.59
DDX39AO00148 AP002490.2-201ENST00000524791 560 ntBASIC18.71■□□□□ 0.59
DDX39AO00148 AC106028.4-201ENST00000614509 607 ntBASIC18.71■□□□□ 0.59
DDX39AO00148 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.71■□□□□ 0.59
DDX39AO00148 LINC00628-201ENST00000628516 1289 ntBASIC18.71■□□□□ 0.59
DDX39AO00148 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX39AO00148 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX39AO00148 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
DDX39AO00148 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
DDX39AO00148 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX39AO00148 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
DDX39AO00148 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
DDX39AO00148 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX39AO00148 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX39AO00148 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
DDX39AO00148 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX39AO00148 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX39AO00148 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
DDX39AO00148 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
DDX39AO00148 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX39AO00148 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
DDX39AO00148 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX39AO00148 AC027307.2-201ENST00000591252 911 ntBASIC18.7■□□□□ 0.58
DDX39AO00148 AL512652.2-201ENST00000625156 1716 ntBASIC18.7■□□□□ 0.58
DDX39AO00148 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX39AO00148 AC106886.4-201ENST00000623557 2502 ntBASIC18.7■□□□□ 0.58
DDX39AO00148 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms