Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM49D1C9J1S8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 AC006449.6-201ENST00000612330 2296 ntBASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRIM49D1C9J1S8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 NCF1C-201ENST00000438382 1427 ntBASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 AP005117.1-201ENST00000584346 1413 ntBASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 PRYP5-201ENST00000451909 266 ntBASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 AC012615.1-201ENST00000565797 1299 ntBASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 AL590326.2-201ENST00000625139 305 ntBASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 IER3-202ENST00000376377 1350 ntBASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 AC002310.6-201ENST00000624451 1377 ntBASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRIM49D1C9J1S8 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM49D1C9J1S8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms