Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CENPBD1B2RD01 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 AC005915.1-201ENST00000624912 2018 ntBASIC15.27■□□□□ 0.04
CENPBD1B2RD01 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 NCF1C-201ENST00000438382 1427 ntBASIC15.27■□□□□ 0.04
CENPBD1B2RD01 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 SCARNA2-201ENST00000458748 420 ntBASIC15.27■□□□□ 0.04
CENPBD1B2RD01 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.27■□□□□ 0.04
CENPBD1B2RD01 AL589182.2-201ENST00000619332 1049 ntBASIC15.27■□□□□ 0.04
CENPBD1B2RD01 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 CICP13-201ENST00000422015 2789 ntBASIC15.27■□□□□ 0.03
CENPBD1B2RD01 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 AC097637.2-201ENST00000624096 1997 ntBASIC15.27■□□□□ 0.03
CENPBD1B2RD01 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CENPBD1B2RD01 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.26■□□□□ 0.03
CENPBD1B2RD01 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 LINC00982-205ENST00000420957 435 ntBASIC15.26■□□□□ 0.03
CENPBD1B2RD01 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 MTDHP3-201ENST00000594186 672 ntBASIC15.26■□□□□ 0.03
CENPBD1B2RD01 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms