Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 AP002490.2-201ENST00000524791 560 ntBASIC17.33■□□□□ 0.36
SRRM3A6NNA2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 AC007967.2-201ENST00000432613 625 ntBASIC17.32■□□□□ 0.36
SRRM3A6NNA2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 AC021087.4-201ENST00000563761 564 ntBASIC17.32■□□□□ 0.36
SRRM3A6NNA2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 OR6D1P-203ENST00000641209 4860 ntBASIC17.32■□□□□ 0.36
SRRM3A6NNA2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRRM3A6NNA2 LINC02228-204ENST00000642115 2962 ntBASIC17.31■□□□□ 0.36
SRRM3A6NNA2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 ME2P1-201ENST00000426028 1970 ntBASIC17.31■□□□□ 0.36
SRRM3A6NNA2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 AL353692.3-201ENST00000407031 1396 ntBASIC17.31■□□□□ 0.36
SRRM3A6NNA2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 AC012640.2-201ENST00000561606 901 ntBASIC17.31■□□□□ 0.36
SRRM3A6NNA2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 AP002472.1-201ENST00000577490 586 ntBASIC17.31■□□□□ 0.36
SRRM3A6NNA2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms