Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 BX842568.4-201ENST00000421222 227 ntBASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 C20orf181-201ENST00000623918 480 ntBASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 RNU1-129P-201ENST00000384064 167 ntBASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 AC023274.1-201ENST00000418278 595 ntBASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 FAM86C2P-203ENST00000528684 1004 ntBASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 U1.21-201ENST00000580816 167 ntBASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 AL031055.1-201ENST00000606362 631 ntBASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 PCDHB17P-201ENST00000539533 2393 ntBASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.09□□□□□ -0.47
SMIM9A6NGZ8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms