Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 AL512638.1-201ENST00000457493 794 ntBASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 PRYP6-201ENST00000514804 343 ntBASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 AC003101.2-201ENST00000612557 442 ntBASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 AL390754.1-201ENST00000619088 582 ntBASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TBC1D3FA6NER0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 AP3S2-216ENST00000617003 1561 ntBASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TBC1D3FA6NER0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 KRT8P39-201ENST00000396270 1433 ntBASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 AC142381.1-201ENST00000426099 345 ntBASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 AC097493.3-201ENST00000509725 367 ntBASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 RARRES2P9-201ENST00000565168 469 ntBASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 AC073389.1-201ENST00000595595 795 ntBASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 AC018529.1-201ENST00000613063 361 ntBASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TBC1D3FA6NER0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms