Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 REXO1L6P-201ENST00000603433 1515 ntBASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 AL390961.4-201ENST00000623958 2535 ntBASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLEKHD1A6NEE1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 AC092552.1-201ENST00000547243 906 ntBASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 AC074044.1-201ENST00000609673 707 ntBASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 MIR8072-201ENST00000614241 80 ntBASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 AL391256.1-201ENST00000443260 1855 ntBASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC25.3■■□□□ 1.64
PLEKHD1A6NEE1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 CDC14C-201ENST00000428251 1719 ntBASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 AC025048.3-201ENST00000590609 569 ntBASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 AC015936.2-201ENST00000593177 259 ntBASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 AC005702.4-201ENST00000618393 416 ntBASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLEKHD1A6NEE1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 CROCCP4-201ENST00000457096 498 ntBASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 PACS1-203ENST00000524815 628 ntTSL 4 BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 RARRES2P5-201ENST00000564013 466 ntBASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC25.28■■□□□ 1.64
PLEKHD1A6NEE1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PLEKHD1A6NEE1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC25.27■■□□□ 1.64
PLEKHD1A6NEE1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC25.27■■□□□ 1.64
PLEKHD1A6NEE1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC25.27■■□□□ 1.64
PLEKHD1A6NEE1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
PLEKHD1A6NEE1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC25.27■■□□□ 1.64
PLEKHD1A6NEE1 GPAA1P2-202ENST00000606848 1787 ntBASIC25.27■■□□□ 1.64
PLEKHD1A6NEE1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms